Pairwise Alignments

Query, 319 a.a., Lactose transport system permease protein LacF from Xanthobacter sp. DMC5

Subject, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  140 bits (354), Expect = 3e-38
 Identities = 94/312 (30%), Positives = 158/312 (50%), Gaps = 12/312 (3%)

Query: 12  KSGEAKASSRATLAD--PRRATRLV-LAIFLGPALLVYCGLTAYPAFRTIYDSFFTIEGM 68
           + G A      +L D    R  RL+ +  FL   +L Y  +  YP  +  Y SF   + +
Sbjct: 6   QQGAASGRPGGSLGDRFSMRTKRLLWIWSFLAIPILFYSVIRFYPTLQAFYLSFTNWDLL 65

Query: 69  -DATFVGLANYRDLMGDETFWVAVRNTFIWSFVAPVIDVATGLLLALALYAGVPFARFLR 127
             A F+G+ANY  L  D  FW   +NTF +  V   I +    ++A  L        F+R
Sbjct: 66  RPAKFIGIANYVKLFKDPQFWKVFKNTFTYLIVGTPISLVLAFVIAFYLDRVRILHGFIR 125

Query: 128 VAWFTPVLLSYVVVAILWMWIYNYD-WGVLNVMLRAVGLGDLASSWLGDPNLALAAVIVT 186
             +F P L +   +A +W W Y     G++N +L  +G+      ++   + AL +V+VT
Sbjct: 126 ALYFLPYLTTAAAMAWVWRWFYQPPPIGIINDVLGMIGIPQ--QPFIRSTDQALYSVMVT 183

Query: 187 HAWKWAGFNMVVCLAAIHSLPKEVLEASDLDNCGWGAKLRYIIIPMLRPTLLSLYILSFI 246
             W   GF +++ +A + ++P    EA+ +D  G  A LR I +P+L+PT + L + S I
Sbjct: 184 AIWAGLGFQIIIFMAGLRAIPTTFYEAARIDGLGEWAILRKITLPLLKPTTVFLVVFSSI 243

Query: 247 GKMKVFDLVWIMT---QGGPLWATETVSTYVYKRAFNWNTFDLGYPSAIATVWFLVVCAA 303
           G +++FD V+ MT    GGPL +T+ +   +Y+ AF  N++ +GY +A   V F ++ A 
Sbjct: 244 GFLRIFDQVYNMTTNDPGGPLGSTKPLVLMIYQTAF--NSYAMGYAAAQTVVLFTILLAV 301

Query: 304 VIILNRVLGSRE 315
            ++   VL  ++
Sbjct: 302 SLVQLWVLREKK 313