Pairwise Alignments

Query, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Xanthobacter sp. DMC5

Subject, 594 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

 Score =  625 bits (1612), Expect = 0.0
 Identities = 325/600 (54%), Positives = 418/600 (69%), Gaps = 15/600 (2%)

Query: 3   YRAPVEEVSYFLKTSTSLPNLMAQGLV-DLSFDVVDAVLDEAGKFAGSVIAPFDRVADKQ 61
           Y APV+++++ LK    L + ++QG++ DLS D+VDA+L+EAG+FA   +AP   + D+Q
Sbjct: 2   YSAPVDDIAFTLKHVAGLEDALSQGVLGDLSEDLVDAILEEAGRFATGEVAPLADIGDRQ 61

Query: 62  GCTLKDGAVTTPEGMRAAYEAWSEAGWSGVAAEEEFGGQNLPTSVTSALTEFWNAASPAF 121
           G  L DG VTTP+G    Y  W+EAGW+ + A EEFGGQNLP  +  A  E WN+ S AF
Sbjct: 62  GAKLADGKVTTPDGWADLYRRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSMAF 121

Query: 122 GICGVLTLGAIEALTAHGSAELQHIFLPKLVSGTWTGTMNLTEPQAGSDLAALRSKAVKQ 181
            +   LT+GA+EA+  HGS +L+ I+LPKLVSG WTGTMNLTEP AGSDL  L+++A + 
Sbjct: 122 ALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTMNLTEPHAGSDLGVLKTRAERN 181

Query: 182 ADGTYRIFGTKIFITYGEHDIAENIVHLVLARLPDAPAGTKGISLFVVPKFLVNADGSLG 241
            DGTYRIFG KIFIT+GEHD A+NI+HLVLARLPDAP GT+GISLF+VPKFL + +G+ G
Sbjct: 182 GDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGAPG 241

Query: 242 ARNDAVCAGIEHKLGLHGSPTCTMTFGE----KGEGAIGYLVGEENRGLACMFTMMNNAR 297
           +RND  C  +EHKLG+HGSPTCTM FG+      +GA+G+L+GEEN+GLACMFTMMNNAR
Sbjct: 242 SRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNNAR 301

Query: 298 LAVGVQGVAVAERATQRAFAFARDRKQGKAPGVEGS--APIIAHPDVKRMLLTMRAETDA 355
           LAVG+QGVA+ E ATQ+A  +A++R QGKAPG +GS  +PII HPD+ R LLTM+A T  
Sbjct: 302 LAVGMQGVAICEAATQKAIEYAKERTQGKAPGWQGSGMSPIIEHPDIARTLLTMKALTQG 361

Query: 356 ARALCLKTADALDRSRLLPDPIARAAALAEASLLTPVAKAFSSDAGIEVSSLGIQVHGGM 415
           +RA+    A A+D +    D   RA     A+LLTP+AK+FS+DAG++V+S+GIQVHGGM
Sbjct: 362 SRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASMGIQVHGGM 421

Query: 416 GYVEETGAAQHLRDARIFAIYEGTNGIQAIDLVTRKLPQEGGDVVNALIADYRETAEEVS 475
           G++EETGAA++LRDARI  IYEGTNGIQAIDLV RKLP   G  V   IA+ RE A   +
Sbjct: 422 GFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREIAARTA 481

Query: 476 ALNAPDFGHAGPRLAEAVDALGRATRVMLDRV-ADEPAKALATATPYLRLYARAAGGAFL 534
           A N  D G     L  +++ L   T  +L R+ A E   ALA AT Y RL+  A  GA+L
Sbjct: 482 ASNRDDLGETARYLEASLNDLETTTDWLLSRIKAGETETALAGATAYQRLFGLALTGAYL 541

Query: 535 ARTALAAYAERAAGATDPRLAARITVARFFAENLAVEAKGLEEVVNGGAGGVLEAEAVLA 594
           A+ AL +         D R   R  + RF AENL  E   L++ V  GA  +  A  +LA
Sbjct: 542 AKGALVS-------VDDGRSGHRAALCRFTAENLLAETAALKDRVISGAASLAAARTLLA 594