Pairwise Alignments

Query, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Xanthobacter sp. DMC5

Subject, 598 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

 Score =  447 bits (1149), Expect = e-130
 Identities = 255/598 (42%), Positives = 355/598 (59%), Gaps = 15/598 (2%)

Query: 3   YRAPVEEVSYFLKTSTSLPNLM-AQGLVDLSFDVVDAVLDEAGKFAGSVIAPFDRVADKQ 61
           Y+APV++  + L     L       G  D + D+++A+  EA K A   + P +   D+Q
Sbjct: 4   YKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSGDQQ 63

Query: 62  GCT-LKDGAVTTPEGMRAAYEAWSEAGWSGVAAEEEFGGQNLPTSVTSALTEFWNAASPA 120
           GC    DG+V+ P+G +AAY+A+ E GW G+A   EFGGQ LP ++ +A+ E+ ++A+ +
Sbjct: 64  GCKRADDGSVSVPDGFKAAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSANLS 123

Query: 121 FGICGVLTLGAIEALTAHGSAELQHIFLPKLVSGTWTGTMNLTEPQAGSDLAALRSKAVK 180
             +   LT GAI A+  HG+ E +  +LPK+V GTW+GTMNLTEP  G+DL  LR+KAV 
Sbjct: 124 LMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGTMNLTEPHCGTDLGLLRTKAVP 183

Query: 181 QADGTYRIFGTKIFITYGEHDIAENIVHLVLARLPDAPAGTKGISLFVVPKFLVNADGSL 240
           Q DG+Y+I G KIFI+ GEH + +NIVHLV+AR+  AP GTKGISLF+VPKFLV  DG+L
Sbjct: 184 QGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKEDGTL 243

Query: 241 GARNDAVCAGIEHKLGLHGSPTCTMTFGEKGEGAIGYLVGEENRGLACMFTMMNNARLAV 300
           G RN   C  IEHK+G+HG+ TC M +    + A GYL+G EN+GL+ MF MMN ARL V
Sbjct: 244 GERNGVTCGAIEHKMGIHGNATCVMNY----DDATGYLLGAENKGLSAMFVMMNEARLGV 299

Query: 301 GVQGVAVAERATQRAFAFARDRKQGKAPG-----VEGSAPIIAHPDVKRMLLTMRAETDA 355
           G+QG++V E A Q A  +ARDR QG++        + + PII HPD++R L+T++A  +A
Sbjct: 300 GLQGLSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEA 359

Query: 356 ARALCLKTADALDRSRLLPDPIARAAALAEASLLTPVAKAFSSDAGIEVSSLGIQVHGGM 415
            RA  L TA   D +    D   R AA     L+TP+ K   +D G + + +  QV GG 
Sbjct: 360 GRAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVMAQQVFGGH 419

Query: 416 GYVEETGAAQHLRDARIFAIYEGTNGIQAIDLVTRKLPQEGGDVVNALIADYRETAEEVS 475
           GY+EE G +Q++RDARI  IYEG NGIQA+DLV RKL   GG  V AL  +  +  EE  
Sbjct: 420 GYIEEHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEENR 479

Query: 476 ALNAPDFGHAGPRLAEAVDALGRATRVMLDRVADEPAKALATATPYLRLYARAAGGAFLA 535
           A         G  L + ++ L  AT   +     +P  A A +T Y+ L+     G   A
Sbjct: 480 ADEKLSLYTKG--LKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQA 537

Query: 536 RTALAAYAERAAGATDPR--LAARITVARFFAENLAVEAKGLEEVVNGGAGGVLEAEA 591
             A AA    AAG+T     L  ++  A+F+ E +  E    +  +  GA  ++E  A
Sbjct: 538 LMAKAASEALAAGSTSDEDFLKTKLVTAKFYMERIMPETALRKARIETGADTMMELAA 595