Pairwise Alignments

Query, 327 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 295 a.a., branched chain amino acid ABC transporter permease from Agrobacterium fabrum C58

 Score =  177 bits (449), Expect = 3e-49
 Identities = 104/298 (34%), Positives = 160/298 (53%), Gaps = 21/298 (7%)

Query: 28  LVQMLNGLQLGILLFLVAAGLTLVFGVMDVINLAHGVQYMLGAYLMVTATALTG-SFWLG 86
           L Q+L GL  G    L++ GL ++FG++ VIN AHG QYMLGA++        G +FW+ 
Sbjct: 13  LGQLLIGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMLGAFVAFLGLQYFGINFWMA 72

Query: 87  LPLALAAALVLGLLLERLVIRQLYGRDHLDQVLATFGIILFVSEAVRMVWGSAPLAIPMP 146
           L +      + G ++ER ++ +LY  D L  +L TFG+ L V    R ++G+A     +P
Sbjct: 73  LIVTPLVVALFGAIVERFMLSRLYDLDPLYGLLFTFGLALVVEGTFRWLYGAAGQPYSVP 132

Query: 147 QALSGSVRLMDGLNY-PVYRLVLIGAGLGVAGLLYVLVTRTRAGMLLRAGATNAPMVSAL 205
           + L+G   L  G  + P YR  ++   L      + L+ +TR G  LRA   N  +V A 
Sbjct: 133 RELAGGTNL--GFMFLPNYRAFVVVISLVACIATWALIEKTRLGSYLRAATENPTLVQAF 190

Query: 206 GVDITALFARIFAFGAMLAAFAGAMAGPILSVEPGMGDNLLILAFVVIVIGGIGSMRGAF 265
           G+++  L    +A GA LA F G +A PI  V P MG NL+I+ F V+V+GG+GS+ GA 
Sbjct: 191 GINVPVLLTLTYALGAGLAGFTGVLAAPIYQVSPLMGTNLIIVVFAVVVVGGMGSIMGAI 250

Query: 266 VAALLVGLIDTLGRSFLTDILKLVMSASAASAAGPALASMSVYVLMAAILFFRPRGLF 323
           V   ++G+ + L + F                  P  +++ ++V+MA +L  RP GLF
Sbjct: 251 VTGYMLGIAEGLTKVFY-----------------PEASNIVIFVIMAFVLLIRPAGLF 291