Pairwise Alignments

Query, 305 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 359 a.a., putative Urea ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 2e-33
 Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 53/328 (16%)

Query: 4   LILAFVLFAALAAVPAFADTAM-LTLVARAMIFALAATSLGFILGQGGLVSFGHAATMGI 62
           L++A  L + L A  A   +A  LTLV + + +A+ A +L  + G  GL+S GH     +
Sbjct: 28  LLVALPLCSLLPADHALHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFAL 87

Query: 63  GAYAVGI-LMEEGVRDALVSFPVAMA-----------------------AAGLFALVTGA 98
           G YA+G+ LM +   D L  F   ++                       A GL ALV G 
Sbjct: 88  GGYAMGMYLMRQAAGDGLPGFMTFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGW 147

Query: 99  ISLRTR--GVYFIMITLAF---GQMAFFVTQSLSAYGGDDGLS---------LAARSTVA 144
            + R+R  GVYF ++T A    G + FF  ++   +GG++G +         +AA+ T A
Sbjct: 148 FAFRSRIKGVYFSIMTQALTFAGMLLFFRNET--GFGGNNGFTSFRTILGFDIAAQGTRA 205

Query: 145 GARWLKDPKTFHYVVLGLLACTVLVSTVLARAPFGRVLAAGRDNERRLRALGVDPYAYRL 204
                        + + LL  ++ +   L R+ FGR+L A RD E R+   G DP  ++L
Sbjct: 206 ---------VLFLLTVALLLASLYLCWRLTRSKFGRLLTAVRDAENRMMFCGYDPRGFKL 256

Query: 205 VAYVIAGAFAGLAGALYANLTEFVSPAYLSWHRSAEFIVMVVAGGPATALGPVLGALGVV 264
           + +V++    GLAGALY      ++P+ +S   S E  V V  GG  T +GP+LGA G+V
Sbjct: 257 LVWVLSAVLCGLAGALYVPQVGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGA-GLV 315

Query: 265 --LLEDGLAHLTEHWRIIFGPLLVLLVL 290
             +         E W    G L +L+ L
Sbjct: 316 NGMKSWFTVAFPEFWLFFLGALFILVTL 343