Pairwise Alignments

Query, 305 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  178 bits (451), Expect = 2e-49
 Identities = 108/299 (36%), Positives = 168/299 (56%), Gaps = 14/299 (4%)

Query: 6   LAFVLFAALAAVPAFADTAMLTLVARAMIFALAATSLGFILGQGGLVSFGHAATMGIGAY 65
           L  ++ A+L A+P    +A  TL    +IFA+AA +   +LG  GL+SFG     G+GAY
Sbjct: 17  LLSLVVASLVALPLLLPSA--TLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAY 74

Query: 66  AVGILM---EEGVRDALVSFPVAMAAAGLFALVTGAISLRTRGVYFIMITLAFGQMAFFV 122
              +LM   + G+  AL+    A       AL+ GA+++R  G+YF+M+TLAF QMA+F+
Sbjct: 75  GAALLMIHLQWGMFAALLG---AAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFL 131

Query: 123 TQSLSAY-GGDDGLSLAARSTVAGARW----LKDPKTFHYVVLGLLACTVLVSTVLARAP 177
             +LS + GGD+GL    R  +  A      L DP+ F+  V  L       +  + R+P
Sbjct: 132 AYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSP 191

Query: 178 FGRVLAAGRDNERRLRALGVDPYAYRLVAYVIAGAFAGLAGALYANLTEFVSPAYLSWHR 237
           FG  L A R+NE R  A+G D   ++++ ++++GA  G+AGALYA L  F   + +    
Sbjct: 192 FGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMM 251

Query: 238 SAEFIVMVVAGGPATALGPVLGALGVVLLEDGLAHLTEHWRIIFGPLLVLLVL-ARGGI 295
           S   ++M + GG  +  G +LGA  +VLL D L+ L   W ++ G +L+L+V+  RGG+
Sbjct: 252 SENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVILILVVVFMRGGL 310