Pairwise Alignments

Query, 503 a.a., Riboflavin transporter RibZ from Xanthobacter sp. DMC5

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  168 bits (425), Expect = 5e-46
 Identities = 123/411 (29%), Positives = 187/411 (45%), Gaps = 27/411 (6%)

Query: 52  IGAFVGQLDATIVQLALPTLATTFDAGLHAVSWVSLGYLVAFASFLPIFGRLCQMYGRKT 111
           +  F+  LD TI  +ALPT++          +WV   + V+ A  LP+ G L + +G   
Sbjct: 23  LATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGEVK 82

Query: 112 LYLLGYLVFVAASALCALAPDLPSLVAARVVQGIGGALLGANSIAILIAAVPEEKRGRAL 171
           L++   L+FV AS LC +A  +P LV  RV+QG+    L   +  +LIA  P  KRG AL
Sbjct: 83  LFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRGMAL 142

Query: 172 GVFAAAQAIGMSAGPAVGGIVLGALGWPWIFWLTVPFGILAAIAGWIALPRTRGAPPEAR 231
            + A    +   AGP +GG +  +  WPWIF++ VP G+ AA      +           
Sbjct: 143 ALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTRPVVTSRQP 202

Query: 232 FDWLGALLLAPALVILVRALN--HAAGWGLTSPETIGSVI----LSAGLIWLLVRQERRA 285
            D++G L L   +  L   L+  +   W  +S   +GS+I    L+  +IW L  +    
Sbjct: 203 MDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWELTDRH--- 259

Query: 286 AFPLVDLKLFANPGFALGAGAVVLGYAMLYAMFFLMSFLLEHGYGEQAWAAGLRLAIIPV 345
             P+V+L+LF +  F +G   +V GYA  + +  ++   L+   G  A  AGL +A I +
Sbjct: 260 --PVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIGL 317

Query: 346 ILGLVAPFSGALADRLGIRLLGASGMGVCLLGLLVLGLGVGDPAASRLMSFVAF------ 399
           +  +++PF G  A R  +R+L          GL  L +G      +   S V F      
Sbjct: 318 LPVIMSPFVGKYAHRFDLRVLA---------GLAFLAIGTSCYMRAGFTSEVDFQHVALV 368

Query: 400 -LLFGAGLGLFIAPNNHDTLKAAPPELATQAGSLLNLMRVLGTSLGVAGAT 449
            L  G G+ LF  P     L   PP        L   +R LG S   +  T
Sbjct: 369 QLFMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTT 419