Pairwise Alignments

Query, 387 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 85/369 (23%), Positives = 144/369 (39%), Gaps = 27/369 (7%)

Query: 1   MKASILFSTALSL-LCAAPALAD-PVKVGVILPQTGVGAVLAKQMQAAIELAVAHEGGKL 58
           +KA +      SL L A  A AD P+    +   +G  A   K       LA+A E  +L
Sbjct: 7   LKAGLALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFASYGKYADMGSRLAIA-EHPQL 65

Query: 59  GGQQVEFFWSDSQGKADVAKQLADEMVKSKRVDFLVGPVFSSEMMAVHGGLARTDAFVIS 118
            G  +++   D++G A  A +   E +      F  G   SS  +AV   + +     ++
Sbjct: 66  LGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMT 125

Query: 119 PISGPAPIAGKSCSANFFNVSSQNDQQAEALGAYLEKL--------GVKRVYVMTVNNQA 170
           P+ G   I GK C+A+ F  S          GA  E L          KR Y +T     
Sbjct: 126 PV-GADEITGKDCNASTFRWS------VPTYGAIRETLVPMSRQLPQAKRWYTITPQYVF 178

Query: 171 GKDMVSGFKRNFKG---DLVGEVYTRFGQVDFAAELSALRTAAPEATFIFYPGDMGVQYV 227
           G  ++   ++ F     + +G  Y    + +F+  L+    A P+   +   G      +
Sbjct: 179 GDALLDNARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNAL 238

Query: 228 KQYAQAGLAKSTPLYTVWTVDQATLPAVGDDAI-GVRSGNVWSVDLPNAANARFVSDFKQ 286
           +Q    G+     +  VW+        +G D + GV  G  +   +    N   V+  ++
Sbjct: 239 RQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAATRK 298

Query: 287 KNGFLPN-DYAAHAYDSILLVSSAVKAVGGDMSRKDDIRKALQKADFASNRGKFAFNT-N 344
             G  PN   AA    + +++ + VKA   D +    +  ALQ   F    G+      +
Sbjct: 299 AYGINPNYPLAADYIGTKVMLEAIVKAGSLDGAA---VSAALQGMRFQGPTGEELIRPGD 355

Query: 345 HFPIEDYYV 353
           H  ++DYY+
Sbjct: 356 HQVLKDYYL 364