Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 307 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  154 bits (390), Expect = 2e-42
 Identities = 102/307 (33%), Positives = 159/307 (51%), Gaps = 29/307 (9%)

Query: 6   QYILSGLAIGGIYALVALGFHIMWSSAKAVNFAHGDTLMIGGLLAVYLLAAGLPLGL--- 62
           Q +++GL IG  YAL+A+G+ +++     +NFAHG+  MIG  +A   LA    +G+   
Sbjct: 9   QQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSL 68

Query: 63  ------ACLVAVAAGGLFGLVLERIAVRPFLSQQGSVGWMLTTIAVGIMVESFATIQTQG 116
                 A L ++     +G  +ER+A RP       +  +++ I + I +++   +    
Sbjct: 69  PLLMTAAFLASIVVTSAYGYSIERVAYRPLRGSNRLIP-LISAIGMSIFLQNTVLLSQDS 127

Query: 117 YARPLPS---------PGVASSVHILGAGIYPQELVIPLVAVVAMLGLRALQRHTLVGRA 167
             + +P+         PG A  V I     Y Q LV  +V +VAMLGL      + +GRA
Sbjct: 128 KDKSIPNLIPGSFSFGPGGAEEVLIS----YMQILVF-VVTLVAMLGLTLFISRSRLGRA 182

Query: 168 MRAVAHNKNAAALMGINVNAVVAFSFALAGLLGAAAGVLVAP---VVQASAAMGVLPGLK 224
            RA A +   A L+GIN N ++A +F +   L A A VL++    V+  +A  G L GLK
Sbjct: 183 CRACAEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA--GFLVGLK 240

Query: 225 GFAVAIIGGITSAPGVVITGLVYGVMEKFVEGYISTAAREIIGFSLMILTLLVFPQGLFG 284
            F  A++GGI S PG ++ GLV GV E F         ++++ F L++L LL  P G+ G
Sbjct: 241 AFTAAVLGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILG 300

Query: 285 KREVMKV 291
           + EV KV
Sbjct: 301 RPEVEKV 307