Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 2e-33
 Identities = 88/295 (29%), Positives = 144/295 (48%), Gaps = 6/295 (2%)

Query: 1   MTTVVQYILSGLAIGGIYALVALGFHIMWSSAKAVNFAHGDTLMIGGLLAVYLLAAGLPL 60
           M    + ++ GL  G +Y+LVA+GF +++ ++   NFA G  ++   L  V LL  G+P 
Sbjct: 1   MAFFFEVLIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPF 60

Query: 61  GLACLVAVAAGGLFGLVLERIAVRPFLSQQGSVGWMLTTIAVGIMVESFATIQTQGYARP 120
            L+ LV +A      L++ER  +RP +  +  +   + T+ +  ++E  A          
Sbjct: 61  WLSFLVTLATMIALALLIERAVLRPLVG-RSPITLFMATLGLAYIIEGAAQALWGAQVHG 119

Query: 121 LPSPGVASSVHILGAGIYPQELVIPLVAVVAMLGLRALQRHTLVGRAMRAVAHNKNAAAL 180
           L      + + + G  +   +L     A   ++ L  L   T +G A+RAVA +  AA  
Sbjct: 120 LELAISDAPLELGGLLLSQFDLFAAATAAALVVLLSLLFNRTRIGLALRAVADDPRAAMS 179

Query: 181 MGINVNAVVAFSFALAGLLGAAAGVLVAPVVQASAAMGVLPGLKGFAVAIIGGITSAPGV 240
           +GI +  V A  +A+AG +G  AG+L    +    ++ ++  LK   V IIGG TS  G 
Sbjct: 180 VGIRLPRVWAVVWAVAGFVGLVAGLLWGARLGVQFSLSLVV-LKALPVLIIGGFTSISGA 238

Query: 241 VITGLVYGVMEKFVEGY----ISTAAREIIGFSLMILTLLVFPQGLFGKREVMKV 291
           ++ GL+ G  EK  E Y    I         + L +L LLV P GLFG+R + +V
Sbjct: 239 IVGGLIIGASEKLAEVYFGPLIGGGIENWFPYVLALLFLLVRPAGLFGERAIERV 293