Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 307 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

 Score =  147 bits (370), Expect = 4e-40
 Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 29/307 (9%)

Query: 6   QYILSGLAIGGIYALVALGFHIMWSSAKAVNFAHGDTLMIGGLLAVYLLAAGLPLGL--- 62
           Q +++GL IG  YAL+A+G+ +++     +NFAHG+  MIG  +A   LA    +G+   
Sbjct: 9   QQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSL 68

Query: 63  ------ACLVAVAAGGLFGLVLERIAVRPFLSQQGSVGWMLTTIAVGIMVESFATIQTQG 116
                 A +  +     +G  +ER+A RP  +    +  +++ I + I +++   +    
Sbjct: 69  PILMTVAFVATIFVTSAYGYSIERVAYRPLRNSNRLIP-LISAIGMSIFLQNTVLLSQDS 127

Query: 117 YARPLPS---------PGVASSVHILGAGIYPQELVIPLVAVVAMLGLRALQRHTLVGRA 167
             + +P+         PG A  V I     Y Q LV  +V +VAM  L      + +GRA
Sbjct: 128 KDKSIPNLIPGSFSFGPGGAEEVLIS----YMQILVF-VVTLVAMTLLTLFISRSRLGRA 182

Query: 168 MRAVAHNKNAAALMGINVNAVVAFSFALAGLLGAAAGVLVAP---VVQASAAMGVLPGLK 224
            RA A +   A L+GIN N ++A +F +   L A A VL++    V+  +A  G L GLK
Sbjct: 183 CRACAEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA--GFLVGLK 240

Query: 225 GFAVAIIGGITSAPGVVITGLVYGVMEKFVEGYISTAAREIIGFSLMILTLLVFPQGLFG 284
            F  A++GGI S PG ++ GLV GV E F         ++++ F L++L LL  P G+ G
Sbjct: 241 AFTAAVLGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILG 300

Query: 285 KREVMKV 291
           + EV KV
Sbjct: 301 RPEVEKV 307