Pairwise Alignments

Query, 285 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Xanthobacter sp. DMC5

Subject, 251 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score =  134 bits (337), Expect = 2e-36
 Identities = 85/237 (35%), Positives = 126/237 (53%), Gaps = 11/237 (4%)

Query: 54  LYGWHTVAEAIGNPKRRFRKLLATENAINRLAEEGLVPPVTPEVVRPGDIDKL---LGPD 110
           +YG H V   + +  +R +++   E   +    + LV   T   V  G  ++    +  +
Sbjct: 6   IYGVHAVEALLRHHPKRVKQVWLAEGR-SEPRVQALVELATQNKVAIGQAERREMDVWVE 64

Query: 111 AVHQGLLAEV-------DHLRSPPLKDLAHSELVLVLDQITDPHNVGAIVRSAAAFGVSA 163
            VHQG++A+V       + +    L     + L+LVLD +TDPHN+GA +RSA A G  A
Sbjct: 65  GVHQGVVADVSPSQVWGEAMLDELLDRTEGAPLLLVLDGVTDPHNLGACLRSADAAGALA 124

Query: 164 IVTTARHSPAATGVLAKSASGGLEHVPFCLVQNLARALTELKDNGMLVVGLDSEGPADIE 223
           ++     S   T V+ K A G  E +P   V NLAR L +L+  G+ VVG   E    I 
Sbjct: 125 VIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEVSIY 184

Query: 224 DTRLSAPLALVLGAEGKGLRQLTRETCDVLARIDLPGAIKSLNVSNAAALALGIARR 280
           D  L+ P  L++GAEGKG+R+LTRE CD L  + + G++ SLNVS A  + L  A+R
Sbjct: 185 DQDLTGPTILIMGAEGKGMRRLTREHCDYLVHLPMAGSVSSLNVSVATGVCLFEAQR 241