Pairwise Alignments

Query, 496 a.a., Periplasmic serine endoprotease DegP from Xanthobacter sp. DMC5

Subject, 496 a.a., deoxyribonuclease HsdR from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  233 bits (595), Expect = 9e-66
 Identities = 152/421 (36%), Positives = 226/421 (53%), Gaps = 28/421 (6%)

Query: 57  AVVNISTSQNVAPSRSVPAPQLPPGSPYEDFFDEFFKRRPEDGSEQRSRRVSSLGSGFVI 116
           AVV++ T  +V  S S  + Q+ P     +FF + F +R   G +  S      GSG +I
Sbjct: 72  AVVHVMTEYSVRSSDSYSS-QMDPF--LREFFGDGFGQRVPRGPQMGS------GSGVII 122

Query: 117 DPSGFIVTNNHVISDADEIFANFNDGSKLKAEVIGRDTKTDLALLKVNPPKPLVAVKFGD 176
             +G+IVTNNHVI  AD+I    +D  K +A ++G D  TD+ALLKV     L  +++G+
Sbjct: 123 ASNGYIVTNNHVIDKADKIEVVLDDKRKFEARLVGTDPTTDVALLKVETEN-LPTIRYGN 181

Query: 177 SEKLRVGDWVMAIGNPFGLGGTLTVGVVSARNRDIN--------SGPYDNFIQTDAAINR 228
           S+ L+VG+WV+A+GNP  L  T+T G+VSA+ R+IN            ++FIQTDAA+N 
Sbjct: 182 SDDLQVGEWVLAVGNPMNLTSTVTAGIVSAKGRNINILRTSQNQDLSIESFIQTDAAVNP 241

Query: 229 GNSGGPLFNMEGEVIGINTAIISPSGGSIGIGFAVPSATAQPVIAQIEQFKEVRRGWIGV 288
           GNSGG L N+ G+++GINTAI S +G   G  FAVPS+    V+  + ++ EV+R  +G 
Sbjct: 242 GNSGGALVNLNGDLVGINTAIASQTGQFAGYSFAVPSSIVSKVVDDLLKYGEVQRALLGA 301

Query: 289 RIQPVTEDIAESLGLGKPRGALIGVVTENSPAAQGGIKAGDVIVKFNGRDIKEVRDLTRT 348
            IQ +    A+  GL    G  I  V E S A + G+K+GDVI   N   + +   L   
Sbjct: 302 SIQEIDAAFAKEKGLKTLNGVYIAQVAEKSGAEEAGLKSGDVITAINSVPVAKSSQLLEQ 361

Query: 349 VADTMADSEVEVVVIRKGKEETLRVKVARMPEDDKPEGSKPAPEAQKVPPRKALGIELSA 408
           VA      +V V  +R GKE + +V +         +  + + E  K    KA+  + + 
Sbjct: 362 VARYRPGDKVTVSYLRDGKERSAKVTL---------KNRQNSTELVKRSEAKAVTFDGAT 412

Query: 409 MSDDLRKRYKIKSEISGVVITDVDRSSAASDKGLKAGQVIVQVGQEAVASPADVEKQIDA 468
                ++  +      G  IT V RSS   D G+K G +I ++ +  V  PADVEK + +
Sbjct: 413 FEPVSKQEMRKLGIDGGAQITGV-RSSKFRDTGMKDGFIITRIDKYEVNEPADVEKYLKS 471

Query: 469 L 469
           L
Sbjct: 472 L 472



 Score = 39.3 bits (90), Expect = 3e-07
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 399 RKALGIELSAMSDDLRKRYKIKSEISGVVITDVDRSSAASDKGLKAGQVIVQVGQEAVAS 458
           R  LG  +  +     K   +K+ ++GV I  V   S A + GLK+G VI  +    VA 
Sbjct: 296 RALLGASIQEIDAAFAKEKGLKT-LNGVYIAQVAEKSGAEEAGLKSGDVITAINSVPVAK 354

Query: 459 PADVEKQIDALRKAGKRSALFLVSDGEGKQEFVTV 493
            + + +Q+   R   K +  +L  DG+ +   VT+
Sbjct: 355 SSQLLEQVARYRPGDKVTVSYL-RDGKERSAKVTL 388