Pairwise Alignments

Query, 742 a.a., Secretin XpsD from Xanthobacter sp. DMC5

Subject, 764 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

 Score =  207 bits (527), Expect = 2e-57
 Identities = 195/699 (27%), Positives = 318/699 (45%), Gaps = 69/699 (9%)

Query: 41  QPVAQPQQPTDNRQPIEYFATPGAQPVTDPAAVGAAGTAQRGADGGYDLNFENTPVTTVA 100
           + V   Q     + P+++  T  A+    PA V A        D    LNF +  +  V 
Sbjct: 48  ETVLDRQSEPAPKPPVQHRVTNSARGHA-PAVVKARNPL---GDQPVQLNFVDADIQAVV 103

Query: 101 KVVLTDILGANVIIDPRVQGTISLSSARPVARTDLAYVLESALRSNGIALVKDASGYQLM 160
           +  L+   G   ++DPRV+G ++L S   V       +L +ALR  G ++V      Q++
Sbjct: 104 RA-LSRATGQQFLVDPRVKGNLTLVSEGQVPAHQAYDMLLAALRMQGFSVVDVGGVAQVV 162

Query: 161 PLTEAA--GSGATDVGTSRPEPGYGVSVVPLRYVSAETLMPVIDSFATRAGMVRVDPGRN 218
           P  +A   G      G+S    G       L+Y +A  L+PV+    +    +   PG N
Sbjct: 163 PEADAKLLGGPIYTAGSS----GMQTRTFRLQYENAVNLIPVLRPIVSPNNPINAYPGNN 218

Query: 219 VLLIQGTAQERQAA------INTALSFDADWMRGQSVGIYPLRNSAPEPLIAELETLLDA 272
            ++I   A+           I+T  + D D +R Q        N     + A +  LL+ 
Sbjct: 219 SIVITDYAENLARVAQIINGIDTPSAIDTDVVRVQ--------NGIAVDIAAMVSELLET 270

Query: 273 GEGGLSHKMVKFQAINRMNSVMVVAKKPDLLRTAATWIERLDRSDSSVG-VRVYRLRYGE 331
            +G    + +      R NS+++ +  P+    A   I +LD + S+   + V  LR  +
Sbjct: 271 -QGADQTQKINVIGDPRSNSIIIRSGSPERTELARNLIYKLDNAQSNPSNMHVVYLRNAQ 329

Query: 332 ARQTARVLNELFNGTSSQGLDQASNQIAPGSGSSASSNGGGSNGPMSVQQRLGQTPTQNQ 391
           A + A+ L  L  G S  G+       A G  S+   NG  + G  + Q   G TPT + 
Sbjct: 330 AGKLAQSLRGLLTGESDSGVSDD----ARGKLSAMGGNGKNTEGTSNAQNSSG-TPTGSG 384

Query: 392 GQGGQNAQPVNRGETDNELQGGSGPSGGGGAILS--GIRITADQVNNSLLIYASQENYRI 449
            Q G        G++     G SG S       S  G+ I AD   N+LLI A    YR 
Sbjct: 385 VQSGY-------GQSTGSTTGTSGTSQDQDTSFSAGGVTIQADATTNTLLISAPDPLYRN 437

Query: 450 IERTLLQLDQPQLQVAIEATVAEVTLNDQLAYGVQFFLTSKDLGLGKNNGSAVNTLSSEI 509
           +   +  LDQ + QV IE+ + EV  +D   +GVQ+   + +LG GK     VN   S +
Sbjct: 438 LREVIDMLDQRRAQVVIESLIVEVGEDDATEFGVQW--QAGNLG-GKGGFGGVNLGGSGV 494

Query: 510 TNQAINR----VLP-GFNLL----------IGRENQPKMILDALHTVTDVKVLSNPSVVV 554
            +   ++    VLP G N+           IG+    K++  AL +     VLS P+++ 
Sbjct: 495 NSTPTSKTSIDVLPKGLNVGLVDGTVDIPGIGKVLDLKVLARALKSKGGTNVLSTPNLLT 554

Query: 555 VDNQKATLQVGDEVPVSTGSATVLT--SSNTVVNTIEYKNTGIILHVTPRVNVNGQVRLD 612
           +DN+ A++ VG  +P  TGS       +SN    T++ +  G+ L+V P+++  G V+LD
Sbjct: 555 LDNEAASIFVGQTIPFVTGSYVTGGGGTSNNPFQTVQREEVGLKLNVRPQISEGGTVKLD 614

Query: 613 IEQEISNVTKQPTANGSSSDGSTLTPTVSQRRVKSTIAVTSGQTVLLAGLISERSDGVRQ 672
           I QE+S V ++     +S    T+T   ++R + ++I +  GQ ++L GL+ +       
Sbjct: 615 IYQEVSTVDER-----ASVTAGTVT---NKRAIDTSILLDDGQIMVLGGLLQDGYSQSND 666

Query: 673 GVPVLDQIPGVGDAFAHKDTTVKRTELIIFIRPQIIRDN 711
            VP L  IPG+G  F ++  +V +T L++F+RP IIRD+
Sbjct: 667 AVPWLSDIPGLGALFRNEKRSVSKTNLMVFLRPYIIRDS 705