Pairwise Alignments

Query, 742 a.a., Secretin XpsD from Xanthobacter sp. DMC5

Subject, 695 a.a., type II secretion system secretin GspD from Dickeya dianthicola ME23

 Score =  132 bits (333), Expect = 5e-35
 Identities = 142/625 (22%), Positives = 262/625 (41%), Gaps = 69/625 (11%)

Query: 107 ILGANVIIDPRVQGTISLSSARPVARTDLAYVLESALRSNGIALVK-DASGYQLMPLTEA 165
           IL  N+IIDP + G IS+ S   +     A    + + + G ++VK D     ++P  ++
Sbjct: 65  ILKKNIIIDPSITGQISVRSYDDLNENQYADFFINVMEAYGYSVVKIDNHTLNVVPQAQS 124

Query: 166 AGSGATDVGTSRPEPGYGVSVVPLRYVSAETLMPVIDSFATRAGM-VRVDPGRNVLLIQG 224
             +   +    R +    V +  +  +S   L P++   A  + + ++     N+ +  G
Sbjct: 125 LRAAWAEGNKGRSK-NIVVRLARMNVLSGAELEPILGLIAENSAVKLKYYSSGNLFIFTG 183

Query: 225 TAQERQAAINTALSFDADWMRGQSVGIYPLRNSAPEPLIAELETLLDAGEGGLSHKMVKF 284
                +  ++     D    R  S    P   +  +   +++   L +    L+ +    
Sbjct: 184 REDVVERLVDIVNQIDN--ARADSS---PTVFNVSQAKASDIAKSLQSTFRNLTPEDKNA 238

Query: 285 QAINRMNSVMVVAKKPDLLRTAATWIERLDRSDSSVGV-----RVYRLRYGEARQTARVL 339
             I   ++   +     +++  A     + R  S++ V     RV+ L+Y +A Q A++ 
Sbjct: 239 PLIYGNDATRTI-----MVKGGAHLRAEISRLISAMDVPGQQSRVFFLKYADAVQMAKLF 293

Query: 340 NELFNGTSSQGLDQASNQIAPGSGSSASSNGGGSNGPMSVQQRLGQTPTQNQGQGGQNAQ 399
                          +N    GS   A  N       MS++  L Q    +   G    Q
Sbjct: 294 T--------------NNNNPSGSPEPAGGN------TMSMEAMLAQQSPGSMSSG----Q 329

Query: 400 PVNRGETDNELQGGSGPSGG-----------GGAILSGIRITADQVNNSLLIYASQENYR 448
           P N         GG+ P+             G  ++   R+ AD+ NN+L++ A     +
Sbjct: 330 PANLD--GQAASGGTTPAADFSNDSNSMFSDGDTLVRQTRVHADRDNNALVVSAPPAAMQ 387

Query: 449 IIERTLLQLDQPQLQVAIEATVAEVTLNDQLAYGVQFFLTSKDLGLGKNNGSAVNTLSSE 508
                + QLD    QV +EA V EV    Q A G+   +   +   G +N +++N  +  
Sbjct: 388 QAASIIQQLDVRHEQVLVEAIVVEV----QKAEGLNLGIAWGNKNYGGSNFNSINVGNGF 443

Query: 509 ITNQAINRVLPGFNLLIGR--ENQPKMILDALHTVTDVKVLSNPSVVVVDNQKATLQVGD 566
                +   L G   L+          + +AL +     +++ PSVV +DN +A   VG 
Sbjct: 444 SQANPLVNALKGTEGLVAGFYHGNWGTLFNALESNKSNNIVATPSVVTLDNHRAEFNVGQ 503

Query: 567 EVPVSTGSATVLTSSNTVVNTIEYKNTGIILHVTPRVNVNGQVRLDIEQEISNVTKQPTA 626
           +VP+ TGS T  T+++ + NT++ +  GI   + PR+N +G + L I QEIS+++     
Sbjct: 504 DVPILTGSQT--TNNDNIFNTVQRRTIGIKFSILPRINQSGTILLTISQEISSLSDTAQV 561

Query: 627 NGSSSDGSTLTPTVSQRRVKSTIAVTSGQTVLLAGLISERSDGVRQGVPVLDQIPGVGDA 686
           N +      L    + R V + + V   +TV++ GL+ +        VP+L  IP +G+ 
Sbjct: 562 NNN------LGAVFNIRTVNNVVQVQDNETVVIGGLLDDEKKETVNKVPLLGDIPWLGNV 615

Query: 687 FAHKDTTVKRTELIIFIRPQIIRDN 711
           F +      +  L++FIRP+IIR +
Sbjct: 616 FRYTSHNDDKRNLMLFIRPRIIRSD 640