Pairwise Alignments

Query, 757 a.a., Biosynthetic peptidoglycan transglycosylase from Xanthobacter sp. DMC5

Subject, 800 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Variovorax sp. SCN45

 Score =  179 bits (454), Expect = 5e-49
 Identities = 135/437 (30%), Positives = 206/437 (47%), Gaps = 47/437 (10%)

Query: 272 FKAPSKYAPHINLPAARARASTVLDNLVEAGFMTEGQVFGARRNPATPVD----RRDDEV 327
           ++ P K+   ++LP  +      +D+ + A     G V  A    A P +    R + E 
Sbjct: 339 YRGPEKF---VDLPTEQKEVDEAVDDAL-AEHPDNGDVIAAVVLDANPKEISAVRANGET 394

Query: 328 PDFYLDYAFGEVKKLVEQLPPSV-IERNFIVRTGLDP-NIQKVADAALESSLNEFGRDYK 385
                D        L  + PP++ I R  ++R    P N  ++      + L E      
Sbjct: 395 IQITGDGLKPAQSGLAAKAPPNIKIRRGAVIRVAKTPKNTWEI------TQLPEV----- 443

Query: 386 VKQGSIVVMEP-NGTLRALVGGRDYGESQFNRATDALRQPGSSFKPYVYTVALMNGYRPS 444
             + + + M+P +G ++ALVGG D+G+++FN  T A RQPGSSFKP++Y+ AL  G+ P+
Sbjct: 444 --EAAFIGMDPRSGAIKALVGGFDFGKNKFNHVTQAWRQPGSSFKPFIYSAALEKGFTPA 501

Query: 445 TIVQDAPICLG-------NWCPQNYGRSYMGSITLKTALQHSLNTVAVRLAERFGRKKIV 497
           T+V DAP+           W P+N+  +Y G + L+TAL  S N V +R+ +  G     
Sbjct: 502 TVVNDAPLYFDPSANGGQPWEPKNFEGTYEGPMPLRTALMKSKNLVTLRVLQSIGAPYAQ 561

Query: 498 DLAHQMGI-RTPLPISAPLPLGAAEVTLFDATTAYSVFANGGKSVYPHAVVEMRIGNGDV 556
           D   + G  +   P + P+ LGA  VT       YSVFANGG  V P+ V ++    G V
Sbjct: 562 DWVTKFGFDKDKQPANLPMGLGAGSVTPMQMAVGYSVFANGGYRVNPYLVTKVTDMKGKV 621

Query: 557 IWRFDRDA-PKPVQIIPQQALYDINDMLNNVVENGTGRRA--RLPNAKVAGKTGTTNAYR 613
           +   +     +  + IPQ+  + ++ +L +VV NGTG +A   L    + GKTGTTN   
Sbjct: 622 LMETEPPVLDESRRAIPQRNAFIMSSLLQSVVRNGTGFKAYQALKRDDLYGKTGTTNDSF 681

Query: 614 DAWFMGFTGNYVCGVWFGNDDYAVMNKM--TGGTLPAMTWQKVMAYAHQGIEIKPIPGVT 671
           D WF GF    V   W G D    +     TGG+L    W   M  A QG+         
Sbjct: 682 DTWFAGFQPTMVGVAWVGYDTPRQLGVRGETGGSLSLPIWTGYMQTALQGV--------- 732

Query: 672 TPIPKLDEPPATMNVPG 688
            P+ +  EPP  + + G
Sbjct: 733 -PMTQPAEPPGVVRIDG 748



 Score =  176 bits (446), Expect = 4e-48
 Identities = 112/312 (35%), Positives = 165/312 (52%), Gaps = 4/312 (1%)

Query: 72  VGRWAVGAASEGFTLGVAGAMVMLALAMPAFRETSDDWLKRTELAVTFLDRYGNSIGERG 131
           +  W       G  + +  A+V +    P   + S     R +L +      G  IGE G
Sbjct: 27  IAGWGAVVVGSGALVVLVAAIVAVVAIYPKLPDVSALSDYRPKLPLRVYSAEGQMIGEFG 86

Query: 132 VKQNDTIPLEDIPDNLIKATLATEDRRFYEHWGIDVAGTARALVTNARAGGVRQGGSSLS 191
            ++ +  P  +IP  +  A LA ED RFY+H G+D  G  RA V + + GG +QG S+++
Sbjct: 87  EERRNLTPFANIPKVMKDAVLAVEDARFYDHGGVDYKGFLRAAVASLK-GGRKQGASTIT 145

Query: 192 QQLAKNLFLSNERTIERKIKEAFLAIWLEARLTKSQILKLYLDRAYLGGGAYGVDAAARY 251
            Q+A+N++LS+ERT+ RK  E  LA+ LE +LTK QIL++YL++ YLG  AYG  AAA  
Sbjct: 146 MQVARNVYLSSERTMSRKTYEILLALRLEQQLTKDQILEIYLNQIYLGNRAYGFAAAAET 205

Query: 252 YFGKSVKEVNLAEAAMLAGLFKAPSKYAPHINLPAARARASTVLDNLVEAGFMTEGQVFG 311
           YFGK +++V +AEAAMLAGL KAP    P  N   ARAR   V+D + E GF+T  Q   
Sbjct: 206 YFGKPLQDVTIAEAAMLAGLPKAPGANNPVANPRRARARQLYVIDRMQETGFITAEQAAA 265

Query: 312 ARRNPATPVDRRDDEVPDFYLDYAFGEVKKLV-EQLPPSVIERNFIVRTGLDPNIQKVAD 370
           A++      D  D      + +Y    V++++  Q   S+      V T L    Q  A 
Sbjct: 266 AKKEELHLRDAADPN--RLHAEYVAETVRQMMYAQYGDSIYTSGLKVYTSLVAADQAAAY 323

Query: 371 AALESSLNEFGR 382
            +L   + ++ R
Sbjct: 324 KSLRKGIMDYER 335