Pairwise Alignments

Query, 520 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  187 bits (474), Expect = 1e-51
 Identities = 158/496 (31%), Positives = 225/496 (45%), Gaps = 31/496 (6%)

Query: 39  RACRLANALLGLGLVKGDRVAVLAYNCIEWVEIYAATAKAGLVAVPINFRLTGREVRFIA 98
           R  RLA+AL G G+ +GD VAV+  N    +E +      G V   +N RL    + F+ 
Sbjct: 52  RCRRLASALAGRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFML 111

Query: 99  ENADVAALIVQDALAGVVEEVRADL---PIGYDRIIHFGSRPAPAGFRDYEALLAAASAR 155
           ++ +   LI       V+E   A L   P+  D               DYEALL      
Sbjct: 112 QHGEAKVLITDREFHAVIEGALALLEHPPLVVDVDDPEYGEGRAVSQLDYEALLNEGDPE 171

Query: 156 EPGQVVLEHDPW---TLMYTSGTTGNPKGAIRSHRGSALLALTTEIELGIHRKDGALLVM 212
              +     D W   +L YTSGTTGNPKG +  HRG+ L AL  ++   +  +   L  +
Sbjct: 172 FAWE--WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTL 229

Query: 213 PMCHANSLYFFGAFAYCGGTINIYSRANFDPEHCVRTLAESGASFTSLVPTHYVLMLGLS 272
           PM H N   +        GT +++ R   DP+  +  + E   S     P   VL   ++
Sbjct: 230 PMFHCNGWCYPWTITALAGT-HVFLR-RVDPQKILTLIREHKVSHLCGAPI--VLNALVN 285

Query: 273 GAERARYDLGSVTKLMVSSAPARPDTKRAVMEMFPNSGLFELYGATET-GWVTFLHPHEQ 331
             E A+  +    + MV+ A        AV +M     +   YG TE  G VT    H++
Sbjct: 286 MPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEQM--GIKVTHTYGLTEVYGPVTVCAWHDE 343

Query: 332 FSKLGSVGRECIGSAP-IRLLDEDGNEVPD-----------GSVGELFSRTPYTFDGYWR 379
           +  L    R  I S   +R    DG  V D            ++GE+F R      GY +
Sbjct: 344 WDALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLK 403

Query: 380 LPEKTREAFRGDYCSVGDMARRDADGYIHLVDRKSNMIISGGENVYPSEVEQVLAAHPQV 439
            PE T EAFRG +   GD+A   ADGYI + DR  ++IISGGEN+   EVE  L  H  V
Sbjct: 404 NPEATAEAFRGGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAV 463

Query: 440 RDVAVIGVPDGKWGERVHAVIVTENG-ASLSEAALAEWVKDGLAGYKRPRSFDFVRHEDI 498
            + AV+  PD KWGE   A +  + G     EA +  W ++ LAG+K P++  F    ++
Sbjct: 464 LEAAVVARPDEKWGETPCAFVALKPGREDTREADITSWCREHLAGFKVPKTVVF---GEL 520

Query: 499 PRNATGKILYRELKTR 514
           P+ +TGKI    L+ R
Sbjct: 521 PKTSTGKIQKYVLRDR 536