Pairwise Alignments

Query, 406 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 402 a.a., Broad-specificity amino acid ABC transporter, substrate-binding protein from Variovorax sp. SCN45

 Score =  363 bits (933), Expect = e-105
 Identities = 188/398 (47%), Positives = 261/398 (65%), Gaps = 3/398 (0%)

Query: 6   MRHSRALLAAAAIGALLTGA-AKAEDTTVKLGVLNDMSGVYADISGPGSVVAAQMAADDF 64
           M  SR  LA A   A   GA A+  D  +++G ++DMSG+Y D  GP    A +MA  D 
Sbjct: 1   MNASRTALALALGAAFSAGASAQVSDDVIRIGFISDMSGLYRDYDGPAGAEAIRMAIADM 60

Query: 65  MAKNKGFKIEVVGADHQNKPDVGASIARKWYDQENVDAILDVTTSSVALAVSDITKEKNK 124
                G KIE+V ADHQNKPD+ A+ AR+W+D + VD ++    S  A+A++ +  +K K
Sbjct: 61  GGAIDGKKIELVTADHQNKPDIAAAKAREWFDVQKVDMLIGGVNSGAAIAMAGVAADKKK 120

Query: 125 IFLVSGGGTSDLTGAKCSPNTVHWTYDTWALANGTGSALTKQGGSPWFFITADYAFGAAL 184
            + V G G S LT   CSP TVH+ YDT A+A GT SA+ K GG  W+F+ ADYAFGAAL
Sbjct: 121 PYFVVGSGASSLTNEYCSPYTVHYAYDTVAMARGTASAVVKAGGKSWYFVAADYAFGAAL 180

Query: 185 ERDASAAVKAAGGKVAGSVKHPLSNTDFSSFLLQAQSSGAKVIGLANAGNDLITAVKQAS 244
           + DA+  V A+GG VAGSVKHPL  +DFSSF+LQAQ+S A+V+ LANAG D + A+K A+
Sbjct: 181 QNDATKTVLASGGTVAGSVKHPLGASDFSSFMLQAQNSKAQVLALANAGGDTVNAIKSAA 240

Query: 245 EFGITQGGQQLAGLLIFSSDVKALGLQAAQGLVLTDAFYWDLNDDTRAFSKRFGAKFNGK 304
           EFG+ +   +LAG++I  +DV ALGL+ +QG+ LTD++YW+ + ++R +S+RF  K + +
Sbjct: 241 EFGLGK-NMKLAGMIITINDVHALGLKTSQGMYLTDSWYWNQSPESREWSRRFFDK-HKR 298

Query: 305 MPTSAQAGVYSSAMHYLNAIKDAKTKDAPKVMEQMRATPINDPLFGKGEIRIDGRAIHPM 364
           MP+S  AG YS+A+ YL A+K A + DA KVM Q+R T  ND     G +R DG  +H M
Sbjct: 299 MPSSFHAGDYSAALQYLQAVKAAGSDDADKVMAQLRKTKFNDMFVKGGWLRDDGLMVHDM 358

Query: 365 YLLKVKKPADSKGEWDLFEVVSTIPANEAFRPLKDGNC 402
           +L++VK PA+SK  WD ++VV  I    A+    +  C
Sbjct: 359 HLMQVKTPAESKEPWDYYKVVEPIRGEAAWTTKAESRC 396