Pairwise Alignments

Query, 338 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 454 a.a., Nitrate/nitrite binding protein NrtA from Xanthobacter sp. DMC5

 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 38/284 (13%)

Query: 11  IALACAVPAAAQPAAKAEKPKLTLGVGGKPLLYYLPLTIAERKGFFKDEGL-DV-AINDF 68
           +A    VPAA   AA  E  K TLG     L+   PL IA+ KGFF   G+ DV  +   
Sbjct: 49  MAFPGGVPAAY--AATPETTKATLGYIA--LMDASPLVIAKEKGFFAKHGVPDVEVVKQA 104

Query: 69  GGGAKSLQALIGGSIDVVTGAYEHTIR--------------------MQAKGQDIVSVIE 108
             GA     ++GG  + + GA+  T                      +     D  ++  
Sbjct: 105 SWGATRDNLVLGGEKNGIDGAHILTPMPYLISTGKVTQNNVPTPMYILARLNLDAQAISV 164

Query: 109 LGRFPGIVLVAR----KDRPIKSVKDLKGAKIGVTAPGSSTNFFVNFLMAKDGLKPDDAS 164
              +  + + A     K+   K   + K  KI +T PG + + ++ + +A  G+ PD   
Sbjct: 165 SNEYKDLKVTANAGALKEAFAKKKAEGKEVKIAMTFPGGTHDLWIRYWLASAGIDPDKDV 224

Query: 165 YVGVGGGASAVAQMKRGEIDAMSNLDPVITKLEDDGDVIILADSRTEAGNEKIFGGENPA 224
              V      VA MK G +DA    +P   +L + G    +  +    G       E+P 
Sbjct: 225 STIVVPPPQMVANMKVGNMDAFCVGEPWNEQLVNQG----IGFTACTTGE---IWKEHPE 277

Query: 225 AVLYMKRDFVEQNPVTTQKLVNAFYKSLQWL-KIATPEDVAAVV 267
             L M+ DFV++NP TT+ ++ A  ++ QW  K+   ++++ +V
Sbjct: 278 KALGMRADFVDKNPNTTRAILKAVMEAQQWCDKMENKKEMSEIV 321