Pairwise Alignments

Query, 338 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 31/271 (11%)

Query: 59  EGLDVAINDFGGGAKSLQALIGGSIDVVTGAYEHTIRMQAKGQDIVSVIELGRFP-GIVL 117
           +G+ V+ ++F  G + L+AL  G+ID+   A   ++  QA G+ +V +     +P GI L
Sbjct: 67  QGVKVSWHEFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGL 126

Query: 118 VARKDRPIKSVKDLKGAKIGVTAPGSSTNFFVNFLMAKDGLKPDDASYVGVGGGASAVAQ 177
           V R+   + SV+DLKG ++  T  G +  + +   + + GL   D +   V   A AVA 
Sbjct: 127 VVREQDHLASVQDLKGKRV-ATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAA 185

Query: 178 MKRGEIDAMSNLDPVITKLEDDGDVIILADSRTEAGNEKIFGGENPAAVLYMKRDFVEQN 237
           ++ G + A++  DP +   E    +  L D    + N   +              F +Q+
Sbjct: 186 LQSGSVQAVTLWDPFLAAAESQPGLKNLRDGSGLSNNRTFY---------LSTASFADQH 236

Query: 238 PVTTQKLVNAFYKSLQWLKIATPEDVAAVVPEEYLLGDKTLYLNAVKNSLPIYSRTGLIP 297
               +       K  QW   A P +VAA++  +  LG  T  L                 
Sbjct: 237 RALLKTFFAELGKVSQWAN-AKPAEVAALLAPQ--LGISTQVLEVAS------------- 280

Query: 298 ERGMKNALNMLVEFDPELKAAKIDLAKTFDG 328
           ER   NA    V   P++ A +  LA TF G
Sbjct: 281 ERRNYNA----VAITPQIVAEQQKLADTFQG 307