Pairwise Alignments

Query, 338 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 17/265 (6%)

Query: 1   MRMLKLAVAAIAL-ACAVPAAAQPAAKAEKPKLTLGVGGKPLLYYLPLTIAERKGFFKDE 59
           MR + L    +AL A AV   A   A+AE  ++     G  +L     T+ +R     ++
Sbjct: 1   MRTVFLRRGLVALFAAAVSFGAITQAQAESLRIGYQKYGTLVLLKAKGTLEKR---LAEQ 57

Query: 60  GLDVAINDFGGGAKSLQALIGGSIDVVTGAYEHTIRMQAKGQDIVSVIELGRFP-GIVLV 118
           G+ V   +F GG + L+ L  GSID         +  QA G D++ V      P    ++
Sbjct: 58  GVQVQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPHSEAIL 117

Query: 119 ARKDRPIKSVKDLKGAKIGVTAPGSSTNFFVNFLMAKDGLKPDDASYVGVGGGASAVAQM 178
             K  PI+SVKDLKG K+ V   GS+ ++ +   +   GLK  D   V +   A A A  
Sbjct: 118 VPKGSPIQSVKDLKGKKV-VLNKGSNVHYLLVRALEDAGLKYSDIQPVYL-PPADARAAF 175

Query: 179 KRGEIDAMSNLDPVITKLEDDGDVIILADSRTEAGNEKIFGGENPAAVLYMKRDFVEQNP 238
           +RG +DA    DP     E       L D +    N + +            R++  Q+P
Sbjct: 176 ERGSVDAWVIWDPYQAAAEQQLQARTLRDGKGLVDNHQFY---------LATRNYATQHP 226

Query: 239 VTTQKLVNAFYKSLQWLKIATPEDV 263
                ++       +W + A P++V
Sbjct: 227 AVINTVIEEVRAVGEWSQ-ANPQEV 250