Pairwise Alignments

Query, 416 a.a., Leu/Ile/Val-binding protein from Xanthobacter sp. DMC5

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 87/347 (25%), Positives = 146/347 (42%), Gaps = 17/347 (4%)

Query: 15  AATALSALAALP-----AAAQQPPIKVGFMTVRSGALAAGGKQMEQGMEYCLAERNGMMG 69
           A  AL AL +LP     A A QP    G  ++ SGA A+ GK  + G    +AE   ++G
Sbjct: 9   AGLALGALGSLPLGAHRAFADQPLTFYGLKSM-SGAFASYGKYADMGSRLAIAEHPQLLG 67

Query: 70  GRKVELITVDTAGQPATTKTRAQELVERERVNAIIGPLAAFEALAIDDYIRQVGVPVISP 129
              ++   +DT G       + QE + ++      G   +  ALA+   I + G   ++P
Sbjct: 68  -HPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMTP 126

Query: 130 SAAAEDLTQRKQNPWFVR-AVGTSAQANHALGEYAAKDLKLKRVVTIGDDFAFGHEATAG 188
              A+++T +  N    R +V T       L   + +  + KR  TI   + FG      
Sbjct: 127 -VGADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDALLDN 185

Query: 189 FQRAFEDNGGKVVQKLWPPLNVADYGSYISQ-IRTDVDAVYAAFAGGNGLRFLQQYAEYG 247
            ++ F + G + +   +  L   ++  Y++  I    D +     G      L+Q   +G
Sbjct: 186 ARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNFG 245

Query: 248 APVKV-IAQMTTVDEGILKSMGKEAV-GVISSGWYTATQDVPGNKEFAAGIRAKYGADPG 305
              ++ +  + +      + +G + + GV     Y    D P NK   A  R  YG +P 
Sbjct: 246 IKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAATRKAYGINPN 305

Query: 306 YYTAGAYAAC-AFLDAAVKAVDGKVEDKQALMKALRSVKLEKGPYGE 351
           Y  A  Y      L+A VKA  G + D  A+  AL+ ++ + GP GE
Sbjct: 306 YPLAADYIGTKVMLEAIVKA--GSL-DGAAVSAALQGMRFQ-GPTGE 348