Pairwise Alignments

Query, 286 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  219 bits (559), Expect = 4e-62
 Identities = 116/286 (40%), Positives = 171/286 (59%), Gaps = 5/286 (1%)

Query: 1   MTFWVSQSLNALALGGLLFMLASGFSLIFGLMRVANLAHGALFMLGAYLGLAAVKAGFGF 60
           +  ++ Q LN L LG + F++A G ++IFGL+   N AHGA F+LGAYL   AV     F
Sbjct: 2   LDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNF 61

Query: 61  WAAAATAAVAVGLLGGIIERTLLRRLAGRTLP---QVLLTLGLAFIIADACLMTWGGDPM 117
           W A   A + V  L   +ER L++R+    LP   Q+L+TLG+A II +A ++ WG    
Sbjct: 62  WLALLIAPLVVAALAWAVERLLIKRIYH--LPHTFQILVTLGIALIIQEASVLIWGPVGK 119

Query: 118 RLPPPPELSGAVRIGDAVFPRYRLFVIGASAAVALGLWLLVERTRAGAMIRAAVDDVGMA 177
            +  PPEL G + +GD ++P YRLF+IG +A + +GLWLL+ERTR GA++RA  +     
Sbjct: 120 NIAVPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETV 179

Query: 178 RAIGVSASTLFTAVFCLGTALAGLGGVIGGPILSVYPSLDQDMLPLALLVVILGGAGSLV 237
             +G +   LF+  F LG  LAG+ GV+  P+    P +  ++L +A +VV++GG GS  
Sbjct: 180 SLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFG 239

Query: 238 GAFVGAYAIGFIYTFGQVLVPDLAYVILFLPMIAVLSVAPQGLFGR 283
           GA VG   +G + +    L P  A ++++  M AV+ V P GLFGR
Sbjct: 240 GALVGGLLVGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGLFGR 285