Pairwise Alignments

Query, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  157 bits (396), Expect = 5e-43
 Identities = 101/302 (33%), Positives = 153/302 (50%), Gaps = 8/302 (2%)

Query: 9   AVALAAMAMVPLFSTSPFYVNLTSQVAIAAIGALGLNVLVGHAGLNSLGFAVFPGLTAYL 68
           ++ +A++  +PL   S     L +++ I A+ AL  N+L+G+ GL S G  +F G+ AY 
Sbjct: 19  SLVVASLVALPLLLPS---ATLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYG 75

Query: 69  VAWLSTVGGIDPVAAALFALGGTLAVSALFALVALRTTGLGFVMITMALCQIVWGAAYRW 128
            A L         AA L A      ++ L   +A+R TG+ FVM+T+A  Q+ +  AY  
Sbjct: 76  AALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTL 135

Query: 129 TSVTGGDNGLSGVPRP-----GGAWLPLEKPEYFLWLCLIVLALALIQLGRFFDSPLGVA 183
           +  TGGDNGL  VPRP     G   + L  P +F     ++  L      R   SP G  
Sbjct: 136 SGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGST 195

Query: 184 LRGTRDQPRRMGAVGYDVWRIRFVAWMLAAAWGAAAGLLYAWYHQFVSPHMMAVTASAEV 243
           L   R+   R  A+GYD    + + +ML+ A    AG LYA    F     + +  S  +
Sbjct: 196 LLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENI 255

Query: 244 LLMVVAGGAGTLAGPLIGAALVVLLKNLASIWIDRWVMLLGFTFVVIVLLMPDGIVPGFS 303
           L+M + GG G+L G L+GA  +VLL ++ S    RW+MLLG   +++V+ M  G+  G +
Sbjct: 256 LIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVILILVVVFMRGGLWGGLT 315

Query: 304 RL 305
            L
Sbjct: 316 EL 317