Pairwise Alignments

Query, 300 a.a., Glycine cleavage system transcriptional activator from Xanthobacter sp. DMC5

Subject, 305 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score =  130 bits (328), Expect = 3e-35
 Identities = 89/287 (31%), Positives = 137/287 (47%), Gaps = 10/287 (3%)

Query: 6   SSNLPSLRGLAALDALARHKRQGAAAEALGISRSALSHRIADLEAELGARLVTRSGRVSM 65
           S  LP L  L   DA ARH     AAE L ++++A+SH+I  LE  LG +L  R  R  +
Sbjct: 2   SKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLL 61

Query: 66  LTDEGTALLAAMGDAIGRIEAAVAPLQRRLRQ--IRLSTVNTLAANWLLPRLPRFQRAHP 123
           LT+EG +    + +   ++  A   LQ R  +  + +S + + A +WL+PRL  F  A+P
Sbjct: 62  LTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAYP 121

Query: 124 DMEIAVLTTQRVVDLDGEDVDCAIRNGMGDWPGTEARLLFRETLVPAAAPGLALG-RPSG 182
            +++ +    R  D   +DVD AI  G G+WPG     L+ E L+P  +P L  G +P  
Sbjct: 122 GIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPLK 181

Query: 183 WPVIRAR------ARFRDWPLWWQQAGQKGEAPAGGMVVENRAQALEAALAGAGVVLTDA 236
            P   A+      A  RDW  + +Q G        G +  + A  L+AA+ G GV L + 
Sbjct: 182 TPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALANN 241

Query: 237 RYLDTHLAAGRLRV-LGPVIELDTGFHFVRSRAPRNPRNVEALARWL 282
               + + AGRL      V+     F+ V   +      + A  +W+
Sbjct: 242 VMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWI 288