Pairwise Alignments

Query, 623 a.a., Sialic acid TRAP transporter permease protein SiaT from Xanthobacter sp. DMC5

Subject, 450 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score =  178 bits (452), Expect = 4e-49
 Identities = 127/429 (29%), Positives = 205/429 (47%), Gaps = 28/429 (6%)

Query: 215 VLAGIPIAFAFAT---ATFGYIALTTRLPHSVVIGRMDEGMSHFVLLSVPLFVFLGVLIE 271
           +L G+P+AFA      ATF Y  L    P    I  M  GM+ F  L++P F+F G L+ 
Sbjct: 14  LLLGMPVAFAIGLSCLATFAYEGL----PFETAIQMMVSGMNVFSFLAIPFFIFSGELML 69

Query: 272 MTGMARAMLAFLASLLGHVRGGLQYVLVGAMYLVSGISGSKAADMAAIAPVLLPEMEKRG 331
             G+A  ++AF  SL+GH +GGL    V A  L  G+SGS  AD +A+  V++P M++ G
Sbjct: 70  HGGIADKIVAFARSLVGHWKGGLGLANVVASTLFGGVSGSPVADTSAMGGVMIPIMKREG 129

Query: 332 ADRGELLALLAATGAQTETIPPSLVLI--------TIGS-----VTGVSIAALFAGGLMP 378
                 + +          +P S  +I         +G+     + GVSI  L   GL+P
Sbjct: 130 YSAAYAVNVTTHASLSGALMPTSHNMIIYAFAAQAAVGTIDGHIIKGVSIGDLMFAGLIP 189

Query: 379 AL-VVGALLCCVVWLRS------RKDDLSGVRR-ASFGEIAKALVVALPAIALPFIIRAA 430
              ++  +L    W  +      R D  + + R   +G + K  + A+P + +  II   
Sbjct: 190 VFWIMVCMLVAAYWQAAKHGYPKRTDGSTMLERFPGWGMVGKTFLAAIPGLMVIVIILVC 249

Query: 431 VIEGVATATEVSTIGIAYAVLAGLLIYRRFDWRRLYPMLVDTAALSGAILLIIGAATGMA 490
           V++GVATATE + I + Y++L  ++ YR     +L+  L   +  +G ILL+IG +  + 
Sbjct: 250 VMQGVATATEAAAIAVTYSLLLTVVAYRTMTREKLFKSLAKASKTTGVILLLIGVSNMLR 309

Query: 491 WALTQSGFSAALAHMMTSLPGGAVGFMLVSLVAFIVLGSLLEGIPAIVLFGPLLFPIARQ 550
           + +       A+  ++ +        +L   +  I LG  L+    I++  PL  P+A Q
Sbjct: 310 YQMAYLEIPDAIETVLLAATTSPWLMLLYINIIQIFLGIFLDMAAHILITTPLFLPLAIQ 369

Query: 551 VGVNEVHYSMVVILAMGIGLFAPPFGVGYYAASAISRIRPDEGMRPMIGYIAALFIGTLI 610
           +GV  V + M+++L   +GL  PP G   +   AI +I   E  +    Y  A+FI   +
Sbjct: 370 MGVGPVQFGMMLLLNCALGLVHPPVGTVQFIGCAIGKISIGEATKTAWPYYLAIFIAITL 429

Query: 611 VAAVPWIST 619
           V  VP  ST
Sbjct: 430 VTYVPAFST 438