Pairwise Alignments

Query, 623 a.a., Sialic acid TRAP transporter permease protein SiaT from Xanthobacter sp. DMC5

Subject, 426 a.a., D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) from Pseudomonas putida KT2440

 Score =  201 bits (512), Expect = 4e-56
 Identities = 118/408 (28%), Positives = 214/408 (52%), Gaps = 5/408 (1%)

Query: 214 MVLAGIPIAFAFA-TATFGYIALTTRLPHSVVIGRMDEGMSHFVLLSVPLFVFLGVLIEM 272
           ++L G+P+A+A   +A  G  A    +P   ++ ++  G++ F LL++P FV  G ++  
Sbjct: 13  LILIGMPVAYALGLSALIG--AWWIDIPLQAMMIQVASGVNKFSLLAIPFFVLAGAIMAE 70

Query: 273 TGMARAMLAFLASLLGHVRGGLQYVLVGAMYLVSGISGSKAADMAAIAPVLLPEMEKRGA 332
            GM+R ++AF   L+G VRGGL  V + A      ISGS  AD A++  VL+PEME++G 
Sbjct: 71  GGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGSVLIPEMERKGY 130

Query: 333 DRGELLALLAATGAQTETIPPS--LVLITIGSVTGVSIAALFAGGLMPALVVGALLCCVV 390
            R    A+  +   Q    PPS   VL ++ +   VSIA+LF  G+MP L++ A++  + 
Sbjct: 131 PREFSTAVTVSGSVQALLTPPSHNSVLYSLAAGGTVSIASLFMAGIMPGLLLSAVMMGLC 190

Query: 391 WLRSRKDDLSGVRRASFGEIAKALVVALPAIALPFIIRAAVIEGVATATEVSTIGIAYAV 450
            + ++K +          E  K    AL  +    II   ++ GV TATE + + + ++ 
Sbjct: 191 LIFAKKRNYPKGEVIPLREALKIAGEALWGLMAMVIILGGILSGVFTATESAAVAVVWSF 250

Query: 451 LAGLLIYRRFDWRRLYPMLVDTAALSGAILLIIGAATGMAWALTQSGFSAALAHMMTSLP 510
              + IYR + WR L  ++  T      ++++IG A    + +T     + +     +L 
Sbjct: 251 FVTMFIYRDYKWRDLPKLMHRTVRTISIVMILIGFAASFGYVMTLMQIPSKITTAFLTLS 310

Query: 511 GGAVGFMLVSLVAFIVLGSLLEGIPAIVLFGPLLFPIARQVGVNEVHYSMVVILAMGIGL 570
                 ++      ++LG++++  P I++  P+L P+   +GV+ VH+ M++++ +GIGL
Sbjct: 311 DNRYVILMCINFMLMLLGTVMDMAPLILILTPILLPVITGIGVDPVHFGMIMLVNLGIGL 370

Query: 571 FAPPFGVGYYAASAISRIRPDEGMRPMIGYIAALFIGTLIVAAVPWIS 618
             PP G   +  SAI ++  +  ++ ++ +  ALF+  + V  +P IS
Sbjct: 371 ITPPVGAVLFVGSAIGKVSIESTVKALMPFYLALFLVLMAVTYIPAIS 418