Pairwise Alignments

Query, 406 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score =  115 bits (289), Expect = 2e-30
 Identities = 95/332 (28%), Positives = 151/332 (45%), Gaps = 17/332 (5%)

Query: 10  LAAGVAVFGLAFSGAAYAADPIKIGLTGPFTGGSSSMGVSMRDGVKLAVDEVNKAGGVLG 69
           LA  VA    A   ++Y    +KIG+ GP TG +++ G     G + A D++N AGGV G
Sbjct: 11  LALAVAT---ALGVSSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNG 67

Query: 70  RPLQLIERDDEAKNEVGVQIAQELINKEGVVATLGYINTGVALASQRFYQEAEIPVINNV 129
             + L++ DD  + +  V +A  L++++ V+  +G+  +   + +   Y EA +  I   
Sbjct: 68  EKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITPG 127

Query: 130 ATGTLISKQFVPPDNKNNYIFRTSANDAIQSAMIADEAVKRQGFKKPAILADSTNYGQLG 189
           +T   ++++ +      + +FR    D  Q  +  D  V     KK A+L D   YGQ G
Sbjct: 128 STNPQVTERGL------SAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQ-G 180

Query: 190 RADLVKA-LATMGVKPVAEEKFNIGDTDMTAQLLRAKEAGADVILTYAIGPELAQIANGM 248
            AD  KA L   GVKPV  E    G+ D +A + + +  GADV+    + PE   +   +
Sbjct: 181 LADATKAQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQL 240

Query: 249 AKLGWK-VPMIGSWTLSMANFIDTAGANGNGAMMPQTFIQLPD-TPKRKAFIEAYQAAYK 306
            + G K V  +    +     + TAG       +  TF   P   P  KA +E ++   K
Sbjct: 241 REQGLKDVKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFR---K 297

Query: 307 IDRMPSPVSAAQGYDSVLLLAAAIKQAGSTDG 338
               P   +    Y S+  LAAA   A S  G
Sbjct: 298 AGTEPEGYT-LYAYASLQALAAAFNGAKSNKG 328