Pairwise Alignments

Query, 299 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  133 bits (335), Expect = 4e-36
 Identities = 89/307 (28%), Positives = 164/307 (53%), Gaps = 16/307 (5%)

Query: 3   VLSQLIVSGIAVGMIYGVIAFSYQLTFATSKTLNFGQGEALMLGALVGLTTINFLIGQAI 62
           +  Q +V+G+ +G +YG+IA  Y + +     +NF  GE  M+ A +   ++  L    +
Sbjct: 4   IFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGV 63

Query: 63  GTLWAYLLMLPIVFAFGLA--QGAVVEWLGVRQAVKAKSEAGWIMATIALGIIFRNLAEN 120
            + +  L++  ++F   +    G  +E +  +  ++  +    +++ I + +I +N A+ 
Sbjct: 64  ES-FPLLMLGTLLFTIVVTGVYGFTIERIAYKP-LRNSTRLAPLISAIGISLILQNYAQI 121

Query: 121 IWGRDALRFPSPLPEAALTI----GPVRIQPMEIAIVIGALAIMLAVEIFNRRSIFGKAV 176
             G      P+ L E A+ +    G V++   +I I++ A   M  +    + +  G+  
Sbjct: 122 SQGARQQGVPTLL-EGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMC 180

Query: 177 VATANDRDAAGLMGIDTRRVITFSYALSSMTAAFAGVLIAPVTLTGATM----GAVLGLK 232
            AT  DR  A ++GI+T RVI++ + + ++ AA AGVLI   T+   T     G ++G+K
Sbjct: 181 RATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLI---TMNYGTFDFYAGFIIGIK 237

Query: 233 AFAVAIIGGLSSGMGVIVGGLILGITETLTGYYISTGYKDVPGLVLLLLVLSLKPSGLFG 292
           AF  A++GG+ S  G ++GG+ILGI+E+L    I++ YKDV    LL+++L  +P GL G
Sbjct: 238 AFTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLG 297

Query: 293 RATIKKV 299
           R  + KV
Sbjct: 298 RPLVAKV 304