Pairwise Alignments

Query, 399 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 417 a.a., leucine/isoleucine/valine transporter permease subunit from Pseudomonas simiae WCS417

 Score =  179 bits (453), Expect = 2e-49
 Identities = 104/289 (35%), Positives = 163/289 (56%), Gaps = 14/289 (4%)

Query: 110 VALFATAAAGLTLQMAFAGVPNFAGAAFFAVGAYVAALLGH-TGIPHLLVLLIAGLAAAV 168
           + ++     GL + +  AG+ +     F+AVGAY  ALL H  G    + L +AG+AAA 
Sbjct: 119 ILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAYTYALLSHYLGWSFWICLPLAGMAAAT 178

Query: 169 LGLVLLLPVLRTRGHYAALVTIAFGLLLRAFLE-VNDVLGGPQGMK-VKSFSLFGLDFSR 226
            G +L  PVLR RG Y A+VT+ FG ++R FL  + D+ GGP G+  +   + FGL F R
Sbjct: 179 FGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRNLTDITGGPNGISSIPKPTFFGLSFDR 238

Query: 227 VTEIG-----PYDVSFYLPYA------LASCALFALAFFLVRRLETSFVGVALDAVRSDE 275
               G      Y    Y P +      L +  L   A F++ RL    +G A +A+R DE
Sbjct: 239 TAAEGMQTFHEYFGIDYNPVSKVVFLYLVALLLALAALFVINRLLRMPIGRAWEALREDE 298

Query: 276 VAASVFGLSIARWKATAFLLGNAMIGVAGALYGMMNGFVNPNSANFGDSLIMLSILVLGG 335
           +A    GL+    K +AF LG A  G AG+ +    G V P S  F +S I+L+I+VLGG
Sbjct: 299 IACRALGLNPTIIKLSAFTLGAAFAGFAGSFFAARQGLVTPESFTFIESAIILAIVVLGG 358

Query: 336 LGNLWGAVVAAVVILVIPEKLQAIQEFRLIIFALLVIAILRFRPSGLMP 384
           +G+  G ++AA+V++++PE ++   E+R+++F  +++ ++ +RP GL+P
Sbjct: 359 MGSQLGVILAAIVMILLPEMMREFSEYRMLMFGAMMVLMMIWRPQGLLP 407