Pairwise Alignments

Query, 399 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  179 bits (453), Expect = 2e-49
 Identities = 133/409 (32%), Positives = 211/409 (51%), Gaps = 36/409 (8%)

Query: 5   DLAPSLPADTARTGGLARLAVAATVALLFAGGGFLLHAEQQGQVIALLAAFVAVFALA-- 62
           DL  SL  +T   G LA +     V ++    G+  +AE +     +    V  F L+  
Sbjct: 18  DLKRSL-LETIVAGLLALIVFGPVVGVVL--DGYTFNAEPRRVAWLVGGVMVGRFLLSLF 74

Query: 63  -EKVPVGRRIVGLCRAHPGTVNLTA------------ALSILAIAAALREEHYTLLMMAT 109
            +  P  R ++G      G V++TA            AL ++AI   +    Y L ++  
Sbjct: 75  LQTAPGQRMLLGFDSGGSG-VHVTAPDYKSRLRYIIPALIVIAIVFPIFANKYLLTVVIL 133

Query: 110 VALFATAAAGLTLQMAFAGVPNFAGAAFFAVGAYVAAL-LGHTGIPHLLVLLIAGLAAAV 168
             ++     GL + +  AG+ +    AF+A+GAY  AL   + G+    VL +A +AAA+
Sbjct: 134 GLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWSVLPLAAIAAAL 193

Query: 169 LGLVLLLPVLRTRGHYAALVTIAFGLLLRAFLEVNDVL---GGPQGMKVKSFSLFGLDFS 225
            G +L  PVLR  G Y A+VT+ FG ++R  L +N+ L   GGP GM   S + FGL+F 
Sbjct: 194 AGCILGFPVLRMHGDYLAIVTLGFGEIIR--LVLNNWLSFTGGPNGMPAPSPTFFGLEFG 251

Query: 226 RVTEIG----------PYDVSFYLPYALASCALFALAFFLVR-RLETSFVGVALDAVRSD 274
           R  + G           Y+ S    +  A   +  LA   ++ RL    VG A +A+R D
Sbjct: 252 RRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALRED 311

Query: 275 EVAASVFGLSIARWKATAFLLGNAMIGVAGALYGMMNGFVNPNSANFGDSLIMLSILVLG 334
           E+A    GL+    K +AF LG +  G+AG  +    GFVNP+S  F +S ++L+I+VLG
Sbjct: 312 EIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALILAIVVLG 371

Query: 335 GLGNLWGAVVAAVVILVIPEKLQAIQEFRLIIFALLVIAILRFRPSGLM 383
           G+G+  G V+AA V+ V PE L++  E+R+++F +L++ ++ +RP GL+
Sbjct: 372 GMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVLMMIWRPRGLI 420