Pairwise Alignments

Query, 297 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

Subject, 291 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  134 bits (338), Expect = 2e-36
 Identities = 84/283 (29%), Positives = 141/283 (49%), Gaps = 4/283 (1%)

Query: 3   NWNDLIFFLELARQGRLMPAARRLKVDHTTVSRRISELEKDLSLKLFDRKPDGFVLTEPG 62
           NW+D   FL + R+  L  AAR L VD  TV RR++ LEK LS  LF R  +G+ LT  G
Sbjct: 2   NWDDARVFLAVCRESTLRGAARVLGVDQATVGRRVNALEKSLSATLFLRTSEGYALTAVG 61

Query: 63  HRLFAVAERIEQEAVGVEETLQAAPSAPRGHVRVASMEGIGAFYLAERFAELAGKEPGLV 122
                  E++E+ A+ +E  +Q       G VRV++ + +   +L    A L  K P + 
Sbjct: 62  EAALLSVEKMERSALDLERQIQGLDDRLTGTVRVSTTDSLAIDFLIPSIARLHDKHPDVR 121

Query: 123 VELVTERHLINLTKREADISISFVPPQGQRLAVRRLGAFRLALYAAPDYVRRFGMPRTRA 182
           V+L     +++L KREADI++    P    L  RR+  + + L+A+ DY+ R G+P   +
Sbjct: 122 VQLDASTQILSLAKREADIAVRNTRPDNPDLIARRIARWPVGLFASQDYIDRHGVPEQGS 181

Query: 183 ELPSHTFVDYVEDLVAIQPVHWLLDVLEPLKVSFRSTSMHAQQNAVARGAGIGLLPLFSA 242
               H  V Y   L + + +  + +     ++    +S    + ++A G G+G +P+++ 
Sbjct: 182 LFEGHDLVVYQPYLQSQKDITLVAEPPGRGRIVAALSSSLLVRRSIAAGIGVGEIPVYTG 241

Query: 243 KSN--PRLIPILTDEVVVMRDIYVSVHEDLEFMGRFRAVLQHL 283
           + +   RL P  T  +    D+++  H DL    R R V+  +
Sbjct: 242 ERDGLVRLWPERTRPLPY--DVWLVTHADLRHTARVRVVIDEI 282