Pairwise Alignments

Query, 1043 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

Subject, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score =  457 bits (1176), Expect = e-132
 Identities = 297/1034 (28%), Positives = 536/1034 (51%), Gaps = 35/1034 (3%)

Query: 3    LNVSAWAIRKPVPALVFFFILTALGIVHFRELPVTQMPNIDLPIVMVTVTQSGAAPSELE 62
            +N+S   I +PV   +    +   G++ ++ LPV+ +P +D P + V     GA+P  + 
Sbjct: 1    MNLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMT 60

Query: 63   TQVTKKVENAIAGISGVKHITSSISEGASVTLVEFHLETLVDRAVNDTRDAITKIRMDLP 122
            + VT  +E     + G++ + S+ S GASV  + F+L+  +D A    + AI      LP
Sbjct: 61   SAVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLP 120

Query: 123  RSIDEPQI-QRIDIEGLPIVTYAVSAPNMTTEQVSWFIDDTLARALQGVRGVAQVKRQGG 181
              +  P +  +++    P++T A+S+  M   +++  +D  +A+ L  + GV  V   GG
Sbjct: 121  SDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGG 180

Query: 182  VDREIRISLNPDRLMSLGITAAEVSRQLRATNLDVSGGRGEVGTQEQPIRTLAGASSVEA 241
              + +RI +N D L + G+   +V   + A+N++   G  +  T+   +       S E 
Sbjct: 181  QRQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240

Query: 242  LADTRIVLSNGRSVRLGELGSVVDGAAEQRVFARLDGKSVVAFGVYRAKGFSDVTVYDRV 301
             A+  +  +NG  +RL ++  +VDGA  +R+ A  +    V   + R  G + + V DR+
Sbjct: 241  YANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRI 300

Query: 302  TEELAKLRAAHP---DVTI-TEIDTTVRFTKSDYESAMHTLIEGAILAVIVVFLFLRDIR 357
               L  +    P   DV++ T+   T+R    D +   H L+   +L V+V F+FLR   
Sbjct: 301  KGLLPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQ---HELLIAIVLVVMVTFVFLRRFS 357

Query: 358  ATLITALAIPLSILPTFWVMDMLGFSLNAVSLLAITLVTGILVDDAIVEIENIVRHMRMG 417
            ATLI ++A+PLS++ TF VM + GFS+N ++L+A+T+ TG +VDDAIV +ENI RH+  G
Sbjct: 358  ATLIPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEG 417

Query: 418  KSPYRAAIEAADEIGLAVVATTLTIAAVFAPVSFMGGIAGQYFKQFGLTVAIAVLFSLAV 477
            ++P +AA++ A +IG  +++ T ++ AV  P+ FM  + G+ F++F +T+A+A+L SL V
Sbjct: 418  ETPMQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVV 477

Query: 478  ARLITPLVAAYFMKDTGHREGRDSL----------VMRGYVRLLAWSVRHRFATIGMGIA 527
            +  +TP++ A  +K     E +             +++ Y   L W ++H+  T+ + +A
Sbjct: 478  SLTLTPMMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVA 537

Query: 528  IFAGSIWLSTLLPSGFLPTNDISRALLSVELPPGSTIAETQKVADDIARAALSLPEVKSV 587
                +++L  ++P GF P  D        E P  ++ A   +    +++  L  P V+S+
Sbjct: 538  SLVLTVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSL 597

Query: 588  YATAGTGGAGGLALSSGEVRKAQVVINLKPRSQRTIDQKTFETQFSKTLAAMPDLRV--- 644
             +  G  G     L+SG     +++INLKP  +R +      ++    +  +  +R+   
Sbjct: 598  SSYIGVDG-DNATLNSG-----RLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQ 651

Query: 645  ---SWSQNGQNTQRGFQVILSGSDGAAVAEAAVAVEKAVRADVPELANVVSSAALDRPEI 701
                 S   + ++  +Q  LS  D   +A+ +  + +A++   PELA+V S       ++
Sbjct: 652  PVQDLSIEDRVSRTQYQFSLSSPDADLLAQWSGKLVQALQ-QRPELADVASDLQDKGLQV 710

Query: 702  RIVPKLDEAAELGVSVDTIAETVRIATIGDISANLAKFSAKDRQIDIRVQLAENARTRLS 761
             +V   D A+ LG+SV  I   +  A  G     ++    +  Q  + +Q ++ A     
Sbjct: 711  YLVIDRDMASRLGISVSQITNALYDA-FG--QRQISTIYTQASQYRVVLQSSDAATIGPQ 767

Query: 762  TFDALKVPTASGGAVPLSAVADVQFGKGPTALDRYDRARRVAVEADLVGDTPLGDALAKV 821
              +++ V    GG V LSA+A ++  +   A+    +   V +  +L     LG+A+  +
Sbjct: 768  ALESIHVKATDGGQVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVI 827

Query: 822  KALPAAQNLPAGVTLKEAGDAEIMAEVFSGFAMAMAAGLMLVLAVLVLLFHDILQPITIL 881
            + +     +P GV  +  G AE      S   + + A ++ +  VL +L+   + PITIL
Sbjct: 828  EQVQKDIGMPLGVQTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITIL 887

Query: 882  VSLPLSVGGAFIALLITGNSVSMPVVIGFLMLMGIVTKNAILLVDFAIES-MHQGVDRFT 940
             +LP +  GA +ALLI+GN + M  +IG ++L+GIV KNAI+++DFA+E+  +QG+    
Sbjct: 888  STLPSAAVGALLALLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRD 947

Query: 941  ALIEAGRKRAQPIVMTTIAMVAGMVPSAMALGEGGSFRAPMAIAVIGGLITSTVLSLVFV 1000
            A+ +A   R +PI+MTT+A + G VP  +A G G   R P+ + ++GGL+ S VL+L   
Sbjct: 948  AIYQAALLRFRPILMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTT 1007

Query: 1001 PAVFTVMDDLSHFL 1014
            P ++   D L+  L
Sbjct: 1008 PVIYLYFDRLARRL 1021