Pairwise Alignments

Query, 1043 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

Subject, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score =  432 bits (1111), Expect = e-125
 Identities = 312/1046 (29%), Positives = 524/1046 (50%), Gaps = 57/1046 (5%)

Query: 3    LNVSAWAIRKPVPALVFFFILTALGIVHFRELPVTQMPNIDLPIVMVTVTQSGAAPSELE 62
            +N+S   IR+PV  ++    +  LG V F  LPV  +P +D P+++V+   SGA+P  + 
Sbjct: 1    MNLSGPFIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMA 60

Query: 63   TQVTKKVENAIAGISGVKHITSSISEGASVTLVEFHLETLVDRAVNDTRDAITKIRMDLP 122
            + V   +E  +  I+GV  +TSS ++G++  ++ F L   +D A  + + AI   R  LP
Sbjct: 61   STVATPLERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLP 120

Query: 123  RSIDE-PQIQRIDIEGLPIVTYAVSAPNMTTEQVSWFIDDTLARALQGVRGVAQVKRQGG 181
              +   P  ++I+    PI+  ++++  +   Q+    D  L+++L  V GV +V+  G 
Sbjct: 121  SGMRSMPTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGS 180

Query: 182  VDREIRISLNPDRLMSLGITAAEVSRQLRATNLDVSGGRGEVGTQEQPIRTLAGASSVEA 241
                +RI++ P  L    ++  EV   +   N     G  E   +   +R      S + 
Sbjct: 181  SLPAVRIAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKD 240

Query: 242  LADTRIVLSNGRSVRLGELGSVVDGAAEQRVFARLDGKSVVAFGVYRAKGFSDVTVYDRV 301
                 I   NG  +RL ++ +V DG   +      + ++ V   V R  G + +   D++
Sbjct: 241  YEPVVIRQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQI 300

Query: 302  TEELAKLRAAHP-DVTITEIDTTVRFTKSDYESAMHTLIEGAILAVIVVFLFLRDIRATL 360
              +L  L++  P  V +          K+  + A HTL+   +L ++VV+LFL  +RA+L
Sbjct: 301  KAQLPALQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASL 360

Query: 361  ITALAIPLSILPTFWVMDMLGFSLNAVSLLAITLVTGILVDDAIVEIENIVRHMRMGKSP 420
            I +LA+P+S++ TF VM + GFSLN +SL+A+ L TG++VDDAIV +ENI RH+  G+ P
Sbjct: 361  IPSLAVPVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPP 420

Query: 421  YRAAIEAADEIGLAVVATTLTIAAVFAPVSFMGGIAGQYFKQFGLTVAIAVLFSLAVARL 480
             +AA   A E+G  +++  +++ AVF  + FMGGI    F++F +T+A A++ SL V+  
Sbjct: 421  MKAAFLGAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLT 480

Query: 481  ITPLVAAYFMKDTGHREGR-----DSLVMR---GYVRLLAWSVRHRFATIGMGIAIFAGS 532
            +TP++ A ++K     + R     D+L  R    Y   L W++RH+  T+   +A    +
Sbjct: 481  LTPMLCARWLKPQQAEQTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIGIN 540

Query: 533  IWLSTLLPSGFLPTNDISRALLSVELPPGSTIAETQKVADDIARAALSLPEVKSVYATAG 592
            I L  ++P   +P  D  + +  +    G +    Q   +   RA L+ P V+SV     
Sbjct: 541  IALYVVVPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQSV----- 595

Query: 593  TGGAGGLALSSGEVRKAQVVINLKPRSQRTIDQKTFETQFSKTLAAMP----------DL 642
               AG +  +SG    A V++ LKP S+R ID +    +  K L  +P          DL
Sbjct: 596  ---AGFIGGNSG-TNNAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDL 651

Query: 643  RVSWSQNGQNTQRGFQVILSGSDGAAVAEAAVAVEKAVRADVPELANVVSSAALDRPEIR 702
            ++      Q + +    + SG D AA+ E    V  A+RA +PEL  + +       ++ 
Sbjct: 652  QLGGGGRDQTSSQYLYTLQSG-DLAALREWFPKVVAALRA-LPELTAIDARDGAGTQQVT 709

Query: 703  IVPKLDEAAELGVSVDTIAETV-------RIATIGDISANLAKFSAKDRQIDIRVQLAEN 755
            +V   D+A  LG+ +D +   +       +I+TI D S N         Q  + +++   
Sbjct: 710  LVVDRDQAKRLGIDMDMVTAVLNNAYSQRQISTIYD-SLN---------QYQVVLEINPK 759

Query: 756  ARTRLSTFDALKVPTASGGAVPLSAVADVQFGKGPTALDRYDRARRVAVEADLVGDTPLG 815
                 ST + ++V TA G  VPLS +A  +      A DR     + A E D+  D   G
Sbjct: 760  YAWDPSTLEQVQVITADGARVPLSTIAHYE---NSLANDRVSHEGQFASE-DIAFDVAEG 815

Query: 816  ----DALAKVKALPAAQNLPAGVTLKEAGDAEIMAEVFSGFAMAMAAGLMLVLAVLVLLF 871
                 A+A ++   A   LP  V  K  G A+  A+   G    +   L+LV  VL +L+
Sbjct: 816  YSPDQAMAALERAVAKLGLPEEVIAKLGGTADAFAQTQQGQPFMILGALLLVYLVLGILY 875

Query: 872  HDILQPITILVSLPLSVGGAFIALLITGNSVSMPVVIGFLMLMGIVTKNAILLVDFAIE- 930
               + P+TIL +LP +  GA +AL +TG   S+  ++G  +L+G+V KNAIL++D A++ 
Sbjct: 876  ESYIHPLTILSTLPSAGVGALLALYVTGGEFSLISLLGLFLLIGVVKKNAILMIDLALQL 935

Query: 931  SMHQGVDRFTALIEAGRKRAQPIVMTTIAMVAGMVPSAMALGEGGSFRAPMAIAVIGGLI 990
              HQG     ++  A   R +PI+MTT+A + G +P  ++  EG   R P+ + +IGGL+
Sbjct: 936  ERHQGFSPEESIRRACLLRLRPILMTTLAAILGALPLLLSQAEGAEMRQPLGLTIIGGLV 995

Query: 991  TSTVLSLVFVPAVFTVMDDLSHFLGR 1016
             S +L+L   P V+  +D L H   R
Sbjct: 996  FSQILTLYTTPVVYLYLDRLRHRFNR 1021