Pairwise Alignments

Query, 1043 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

Subject, 1051 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  487 bits (1254), Expect = e-141
 Identities = 312/1048 (29%), Positives = 538/1048 (51%), Gaps = 38/1048 (3%)

Query: 3    LNVSAWAIRKPVPALVFFFILTALGIVHFRELPVTQMPNIDLPIVMVTVTQSGAAPSELE 62
            + ++  +I++    +V F ILT LGI  + ++    +P     +V V+    GAAPSE+E
Sbjct: 1    MQITKISIKRSTIVVVLFTILTLLGIFSYTQMSYELLPKFSPNVVTVSTVYPGAAPSEVE 60

Query: 63   TQVTKKVENAIAGISGVKHITSSISEGASVTLVEFHLETLVDRAVNDTRDAITKIRMDLP 122
              VT+K+E+A+A + G+  + S+  E  S+  +E   +  VD  + D +  I  +  DLP
Sbjct: 61   NSVTRKLEDALASLEGIDVMKSTSLESFSIITIELDDDVDVDLILQDAQRDIDAVLGDLP 120

Query: 123  RSIDEPQIQRIDIEGLPIVTYAVSAPNMTTEQVSWFIDDTLARALQGVRGVAQVKRQGGV 182
              +D P + +  ++ +PI+     + N+T       +D  +   +  + GVAQV   GG 
Sbjct: 121  EDVDPPSLGKFSLDDMPIMQMGAYS-NLTATDFYDLMDQRIQPMISQIDGVAQVNLLGGA 179

Query: 183  DREIRISLNPDRLMSLGITAAEVSRQLRATNLDVSGGRGEVGTQEQPIRTLAGASSVEAL 242
            +REI+++L+ ++L + GI+  +V++ +   NLD   G+ +   ++  IR     + V+ +
Sbjct: 180  EREIKVNLDQNKLNTYGISPLQVNQAIAQANLDFPTGKLKSDKEQILIRLAGKFTQVDEI 239

Query: 243  ADTRIVLSNGRSVRLGELGSVVDGAAEQRVFARLDGKSVVAFGVYRAKGFSDVTVYDRVT 302
             +  +  ++G  +++ ++  VVD   ++ + +RL+G S +   + +    + V V +RV 
Sbjct: 240  GELIVSYADGSPIKIKDVAEVVDSNKDEEILSRLNGNSAIGISIQKQSDANAVDVAERVN 299

Query: 303  EELAKLRAAHP--DVTITEIDTTVRFTKSDYESAMHTLIEGAILAVIVVFLFLRDIRATL 360
            + LA+L   +   D+       +  FT     + +H LI   +L  +++ LFL   R  +
Sbjct: 300  KALAQLETTYAGDDLRFEISQDSSEFTLEAANAVIHDLIIAVVLVAVIMLLFLHSFRNAV 359

Query: 361  ITALAIPLSILPTFWVMDMLGFSLNAVSLLAITLVTGILVDDAIVEIENIVRHMRMGKSP 420
            I  +A+P+SI+ TF VM + GF+LN +SLLA++LV GILVDDAIV IENI RHM  GKS 
Sbjct: 360  IVMIAVPMSIIATFTVMYLAGFTLNLMSLLALSLVVGILVDDAIVVIENIYRHMEKGKSA 419

Query: 421  YRAAIEAADEIGLAVVATTLTIAAVFAPVSFMGGIAGQYFKQFGLTVAIAVLFSLAVARL 480
             +A+ +   EIG  V + TL I  VF P+S  GG+      QF +TVA+A + SL VA  
Sbjct: 420  IQASYDGIREIGGTVTSITLVIVVVFVPLSMTGGLISGILTQFSITVAVATMMSLLVAFT 479

Query: 481  ITPLVAAYFMKDTGHREGRDSL--VMRGY-----------VRLLAWSVRHRFATIGMGIA 527
            + PL+ + F K   H + +     ++ G+             +L WS  H+  T+     
Sbjct: 480  LIPLLTSRFSK-LEHLDPKSIFGKIVNGFEGFLDAFVAWLTGILKWSFNHKIITLVATFV 538

Query: 528  IFAGSIWLST--LLPSGFLPTNDISRALLSVELPPGSTIAETQKVADDIARAALSLPEVK 585
            +F  S  L     + S F+   D    ++ +ELP  +T+ ET     +        P V 
Sbjct: 539  LFVSSFMLVGYGFIGSEFVSQGDKGEFIMRLELPKSATLEETNFTTREAENFLTKNPMVT 598

Query: 586  SVYATAGTGGAGGLALSSGEVRKAQVVINLKPRSQRTIDQKTF----ETQFSKTLAAMPD 641
            SV+ T G    G ++ S      +++ + +    +R +    F    E    + +     
Sbjct: 599  SVFTTVGQT-TGSMSGSQSTPYASEITVKMVDGKKRNLTAPEFAREMEIALEENIVGAEF 657

Query: 642  LRVSWSQNGQNTQRGFQVILSGSDGAAVAEAAVAVEKAVRADVPELANVVSSAALDRPEI 701
              V     G       Q++LSG D   +   +  V   V   VP      +S     PEI
Sbjct: 658  TAVPIGITGTANDAPIQIVLSGPDLDTLKSFSQRVLAEVEK-VPGTRKAQTSLEDGNPEI 716

Query: 702  RIVPKLDEAAELGVSVDTIAETVRIATIGDISANLAKFSAKDRQIDIRVQLAENARTRLS 761
            R+     + ++LG+ +  +  T+++A  G+      K+   D + DI +++ E  R  ++
Sbjct: 717  RVEVDRAKMSDLGLDMAMVGGTMQVAFNGNTDT---KYRDGDYEYDINIRMDEFDRKSVA 773

Query: 762  TFDALKVPTASGGAVPLSAVADVQFGKGPTALDRYDRARRVAVEADLVGDTPLGDALAKV 821
              + L      G  V L   A     +GP+ L+R DR   V V++ + G  P G    ++
Sbjct: 774  DIENLAFVNTKGQTVLLKQFAKAIPSEGPSELNRQDRITSVTVQSQVSG-RPSGTVGTEI 832

Query: 822  KALPAAQNLPAGVTLKEAGDAEIMAEVFSGFAMAMAAGLMLVLAVLVLLFHDILQPITIL 881
            +   A  +LP  VT+   GD ++  E F    +A+ A ++L+  ++V L+ + + P+ ++
Sbjct: 833  QERIAKLDLPKEVTVAYEGDMKMQEEGFGSLGVALLASILLIYLIMVALYDNYVFPLVVM 892

Query: 882  VSLPLSVGGAFIALLITGNSVSMPVVIGFLMLMGIVTKNAILLVDFAIESMHQGVDRFTA 941
             SLPL+V GA +AL ++G+++S+  ++G +MLMG+V KNAILLVDF  +    G++   A
Sbjct: 893  FSLPLAVIGALLALAMSGSALSIFSILGLIMLMGLVAKNAILLVDFTNQLKAAGLEVKAA 952

Query: 942  LIEAGRKRAQPIVMTTIAMVAGMVPSAMALGEGGSFRAPMAIAVIGGLITSTVLSLVFVP 1001
            L++A   R +PI+MTT+AMV GM+P A+A G G  ++  +A A+IGGLI+S  L++V VP
Sbjct: 953  LVKAVEIRFRPILMTTLAMVFGMLPIALASGAGAEWKNGLAWALIGGLISSMFLTMVVVP 1012

Query: 1002 AVFTVMDDLSHFLGRIFGRFIGGKDEPD 1029
             ++ + D       RI  RF  GKD+ +
Sbjct: 1013 VIYYIFD-------RILARF--GKDKKE 1031