Pairwise Alignments

Query, 568 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 466 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  109 bits (273), Expect = 2e-28
 Identities = 112/443 (25%), Positives = 196/443 (44%), Gaps = 23/443 (5%)

Query: 6   LRYDLESHPPLPVLIGSVAQHMGLMAVTLVFPLLVAQAA-GVDAEMQRRYLDLAMLAMGV 64
           L ++LE  PP    +     H+  + V +V P L+  AA  + AE     + +AM+A G+
Sbjct: 11  LIFELEDRPPFHQALVGAITHLLAIFVPMVTPALIVGAALQLSAETTAYLVSMAMIASGI 70

Query: 65  ATLFQC-----WGRPILFLPRTGCGYLLPAVFTAAYLPAALYAARAGGLEAVAGMTIAAG 119
            T  Q       G  +L +      ++   +   + + +  +      + ++ G++    
Sbjct: 71  GTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIALGSSMKSDGFHEELI-MSSLLGVSFVGA 129

Query: 120 IAEVLFSRVMHRVRPFLPIEIVGLVVMLIGIILGVVAIKLMVGYSQSMAQVTLTGTGGAV 179
              V  S ++  +R  +   + G+VV++IG+ L  V I    G   + +  T        
Sbjct: 130 FLVVGSSFILPYLRRVITPTVSGIVVLMIGLSLIKVGIIDFGGGFAAKSSGTFGNYEHLG 189

Query: 180 AGLAVMIALAAWG---SPPLRAMAVLAGLAAGSAVHLALGFGAPRPEVSVKPLLELIRWP 236
            GL V+I +  +    SP LR   +  GL  G    L LG      + S    L LI  P
Sbjct: 190 VGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVGYIASLCLGM----VDFSSMRNLPLITIP 245

Query: 237 LVVP-SFSVGLLPGFLAGA--LACILRSFGDMVASQRANDPQWRRPDY-ANIEAGVLADG 292
                 FS       + G   L  +L + GD+ A+   +    +  +Y + ++ GVLADG
Sbjct: 246 HPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATAMVSRRPIQGEEYQSRLKGGVLADG 305

Query: 293 LGTLFAGLIGTMGLNTYSASVGLSVATEVKARRVGLGVGLGWIALAFIPGSSVVVMAIPR 352
           L ++ A  +G++ L T++ + G+   T V +R VG  + +  + L   P        IP 
Sbjct: 306 LVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGRTIAVMLVILGLFPMIGGFFTTIPS 365

Query: 353 PVLGAALLFASAFIVLSGISILGQRMLDARRTIVV--GLGFLVGISFDEIPDFYARVLSE 410
            VLG A+    + I ++GI I+    L  R T++V   LG  +G+S+D  P+ + ++L  
Sbjct: 366 AVLGGAMTLMFSMIAIAGIRIIITNGLKRRETLIVATSLGLGLGVSYD--PEIF-KILPA 422

Query: 411 SARELVTSSLVLGLFTALALNAL 433
           S   LV + +  G  TA+ LN +
Sbjct: 423 SIYVLVENPICAGGLTAILLNII 445