Pairwise Alignments

Query, 445 a.a., Isopentenyl-diphosphate delta-isomerase from Xanthobacter sp. DMC5

Subject, 539 a.a., putative Glutamate synthase, large subunit from Pseudomonas putida KT2440

 Score =  130 bits (326), Expect = 1e-34
 Identities = 114/384 (29%), Positives = 173/384 (45%), Gaps = 41/384 (10%)

Query: 54  FLGASMSRYPLEGYREKCGTEVTLGTRFAKKPITLKTPVTIAGMSFGALSAQAKEALGRG 113
           F+G SM   PL    +     V +G     +P +      I+ MSFG+LSA A  AL +G
Sbjct: 125 FIGHSMRPAPLA---DPTSFRVIVGGPQCGQPYSASI-FNISAMSFGSLSANAIRALNQG 180

Query: 114 ASTVGTSTTTGDGGMTPEERGQSKTLVYQYLPSRYGMNPVDLR-------------KADA 160
           A        TG+G ++P  R     LV++     +G    D R             +   
Sbjct: 181 AKLGNFHHDTGEGSISPYHREHGGDLVWELGSGYFGCRTPDGRFDPERFAAQARSPQVRM 240

Query: 161 IEIVIGQGAKPGGGGMLLGQKISDRVAAMRTLPKGIDQRSACRHPDWTGPDDLEIKIEEL 220
           IEI + QGAKPG GG+L   K++  +A  R +  G D  S  RH  ++ P ++   I +L
Sbjct: 241 IEIKMSQGAKPGHGGILPKHKVTQEIAETRGVLMGEDCISPSRHSAFSTPIEMMQFIAQL 300

Query: 221 REITDWEKPIYVKVGASRPYYDTALA---VKAGA--DVVVLDGMQGGTAATQDVFIEHVG 275
           RE++   KP+  K     P+    +A   ++ G   D +V+DG +GGT A    F +H+G
Sbjct: 301 RELSGG-KPVGFKFCLGHPWEFMGIAKAMLETGILPDFIVVDGKEGGTGAAPVEFTDHIG 359

Query: 276 IPILAAIRPAVQALQDLDMHRKVQLIVSGGIRTGADVAKALALGADAVAIGTAALVALGD 335
           +P+   +      L  L++  K++L  SG I +  D+A  LA+GAD        + A+G 
Sbjct: 360 VPLREGLLFVHNTLVGLNLRDKIKLGASGKIVSAFDIASVLAIGADWANSARGFMFAIGC 419

Query: 336 NDPQWEDEYQALGSTAGAYDDWHEGRDPAGITTQDPELSKRL-DPVKAGRRLANYLSVMT 394
              Q                  H  + P G+ TQDP   + L  P KA R L  + + + 
Sbjct: 420 IQSQ----------------SCHTNKCPTGVATQDPLRQRALVVPDKAQRVLNFHHNTLR 463

Query: 395 LEAQTIARACGKSHLHNLEPEDLV 418
             A+ +A A G  H   LE + LV
Sbjct: 464 ALAEMLA-AAGLEHPAQLEAKHLV 486