Pairwise Alignments

Query, 355 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 76/313 (24%), Positives = 135/313 (43%), Gaps = 25/313 (7%)

Query: 18  LAGLGAGAAAVSLPGLARAQDKTLVVSNWGGDWNERTIKFVEAPLVESQGIKIVRDLGME 77
           + GL A   A+ L     AQ   +VV  +GG   +   + +  P V   G ++++     
Sbjct: 7   VTGLCAALLALGLSNAQAAQQ--MVVVGYGGAGQKAQDEAIFKPFVAQDGSQLIQSEYNG 64

Query: 78  PERKAKLIAEKRLRRGTID--VIHINEGDSVELYAQEVIDNIDFSKVPNYADVVPALKSK 135
              + +++A+     G +D  V+ I   D +    + + + +D+ ++ + A+++PA    
Sbjct: 65  EMARIQVMADT----GNVDWDVVQIEGPDLMRGCDEGIYERLDWQRLGHAAELIPAAAQD 120

Query: 136 PFFVPWLYSGVTIIYNKDKVPNPPKSYAELWD-KKWAGKIGLTNQLYFN--YIMMAGLIK 192
                 ++S V I Y++ K+   P S+A+ WD  K+ GK GL  +  +N  + ++A  +K
Sbjct: 121 CGSAALVWS-VAIAYDRSKLAQAPASWADFWDVDKYPGKRGLRKRAVYNLEFALLADGVK 179

Query: 193 GGNV-------TNTEEGKARLIELKELTQPRIYAAHQQLGAGLVNGEVDIAVNYKARGLQ 245
             +V          E   A+L ELK   Q   + A  Q    L  G+V +   Y  R   
Sbjct: 180 VEDVYRVLSTPAGVERAFAKLSELKPHIQ--WWDAGAQPAQWLAAGDVVMTSTYSGRIAV 237

Query: 246 WANDGAPLAIGYPSEGAIAVMFGAALPKKAPSPDLSLIYFNAMLDPKAMAGLAGASFYAP 305
            A  G+PLA+ +P  G++  M   A+ K +   D +         P           Y P
Sbjct: 238 AAQQGSPLAVVWP--GSLYGMDYWAIIKGSRHVDQAKRLIAYANQPDTQVRYVQQIPYGP 295

Query: 306 ANSK--AELSPEL 316
            N++  A L P L
Sbjct: 296 TNTQAAARLDPAL 308