Pairwise Alignments

Query, 355 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 344 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 83/338 (24%), Positives = 140/338 (41%), Gaps = 20/338 (5%)

Query: 25  AAAVSLPGLARAQDKTLVVSNWGGDWNERTIKFVEAPLVESQGIKIVRDLGMEPERKAKL 84
           A A+ L    +A    L V ++GG      +K    P  ++   KIV   G      AK+
Sbjct: 9   ALALGLFTAGQAMAADLTVISFGGANKAAQVKAFYEPWEKAGNGKIVA--GEYNGEMAKV 66

Query: 85  IAEKRLRRGTIDVIHINEGDSVELYAQEVIDNIDFSKVPNYADVVPALKSKPFFVPWLYS 144
            A    +  + +++ +   +      + + + +D +   N AD VP    +P  V +   
Sbjct: 67  KAMVDTKSVSWNLVEVESPELARGCDEGMFEELDPALFGNEADYVPGA-IQPCGVGFFVW 125

Query: 145 GVTIIYNKDKVPNPPKSYAELWD-KKWAGKIGLTNQLYFNYIMMAGLIKGG-------NV 196
              + YN DK+   P S+A+ WD K++ GK GL       Y M   L+  G        V
Sbjct: 126 STVMAYNADKLKTAPTSWADFWDTKQFPGKRGLRKGA--KYTMEFALMADGVAPKDVYKV 183

Query: 197 TNTEEGKARLIELKELTQPRI--YAAHQQLGAGLVNGEVDIAVNYKARGLQWANDGAPLA 254
             T+EG+ R  +  +  +P I  + A  Q    L +G+V ++  Y  R +      + L 
Sbjct: 184 LATKEGQDRAFKKLDELKPSIQWWEAGAQPPQFLASGDVVMSSAYNGR-IAAVQKESNLK 242

Query: 255 IGYPSEGAIAVMFGAALPKKAPSPDLSLIYFNAMLDPKAMAGLAGASFYAPANSKAE--L 312
           + +   G I      A+PK A + + +  +    + P+     +    Y PANSKA   L
Sbjct: 243 VVW--NGGIYDFDAWAIPKGAKNVEEAKKFIAYSVKPEQQKIYSENIAYGPANSKAVSLL 300

Query: 313 SPELKAKVDFTAAEAAALKFPDYAHVAKNTAEWLEWWN 350
           S E+K  +  T    A     D A  A N+ +  + +N
Sbjct: 301 SDEVKKDMPTTPENIANQVQIDVAFWADNSEQLEQRFN 338