Pairwise Alignments

Query, 308 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 285 a.a., Putrescine transport system permease protein PotH from Xanthobacter sp. DMC5

 Score =  188 bits (477), Expect = 1e-52
 Identities = 112/294 (38%), Positives = 162/294 (55%), Gaps = 15/294 (5%)

Query: 14  AAASPPAPRGREGRRLAPAYGLTAPATIFVLLALMGPLALMFRYSLNRFVPGQMMVEALT 73
           A A  P PR          + LT P   F  L  + PL L+   S   F   + M   L 
Sbjct: 2   AGALDPKPRD---------WALTLPLAAFFALFFIAPLGLLVAIS---FETERQMTGTLG 49

Query: 74  LDNYARFFADSFYQEVLGTTLWISALSTLLCLVAGFPVAYFLVRQASDKWKGRLLLLIVL 133
           L  YA F +D     VL  TL + A +TLLCL+ G+P+A+ L  + S +W+  L+ L+VL
Sbjct: 50  LGQYAAFLSDGLNLAVLRDTLLVGAKATLLCLLFGYPLAW-LCTKVSARWQAVLIFLVVL 108

Query: 134 PLLMGNAVRTAAWMVILGDKGLFNAVIGAIGIT--PVKLMYTPTAVVIGLVSVLLPFMIV 191
           P++    VRT AW+VILG  G+ N  I A+G++  P+KL+++ T VVI L  V +P M++
Sbjct: 109 PIVTSVVVRTFAWIVILGRHGIVNEAILALGLSAQPLKLLFSETGVVIVLAQVQMPLMVL 168

Query: 192 TLQSVIEGIDANLESAAQSLGASHLTVLRRVVLPLALPGILAGTMLCFILSMNAYATPVL 251
            L + ++ ID NLESA+Q+LGA       +V LPL+LPGI+AGT+L +   + A+ T  L
Sbjct: 169 PLITTLQRIDPNLESASQALGAGAWRTFFKVTLPLSLPGIIAGTILTYTACVTAFVTQSL 228

Query: 252 IGGPSFHMMAPTVYQQVAKAMNWPFGAALAFVLMAVTLVLTTTANVLVQRRYRR 305
           IGG     M   ++QQ     NWPF AA++ + M   L++      L + R  R
Sbjct: 229 IGGSRLLFMPMMIFQQAMDLQNWPFAAAVSVIFMVSVLLIVAMLVALSRSRAAR 282