Pairwise Alignments

Query, 308 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

 Score =  132 bits (332), Expect = 1e-35
 Identities = 80/221 (36%), Positives = 122/221 (55%), Gaps = 3/221 (1%)

Query: 72  LTLDNYARFFADSFYQEVLGTTLWISALSTLLCLVAGFPVAYFLVRQASDKWKGRLLLLI 131
           L L NY     D  Y      +L ++  STLLCL+ GFP+AY  +  A  + +  LLLLI
Sbjct: 70  LNLANYGLLTEDELYLSAYLGSLKMAFFSTLLCLLIGFPMAY-AIANAKKETQTVLLLLI 128

Query: 132 VLPLLMGNAVRTAAWMVILGDKGLFNAVIGAIGIT--PVKLMYTPTAVVIGLVSVLLPFM 189
           ++P      +R  AWM IL + GL N  +   G+   P++++ T  AV IG+V   LPFM
Sbjct: 129 MMPTWTAILIRVYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFM 188

Query: 190 IVTLQSVIEGIDANLESAAQSLGASHLTVLRRVVLPLALPGILAGTMLCFILSMNAYATP 249
           I+ L + +   D +L  AA  LG+S      ++ +PL+  GI+AG ML FI  +  +  P
Sbjct: 189 ILPLFANLVKHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIP 248

Query: 250 VLIGGPSFHMMAPTVYQQVAKAMNWPFGAALAFVLMAVTLV 290
            L+GGP   M+   ++Q+     +WP  +ALA V++A+ +V
Sbjct: 249 ELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIV 289