Pairwise Alignments

Query, 351 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

Subject, 353 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  281 bits (719), Expect = 2e-80
 Identities = 162/336 (48%), Positives = 219/336 (65%), Gaps = 14/336 (4%)

Query: 1   MSDVVLQSIVKRYDAMTAVDHVSLTISEGELVALLGPSGCGKTTTLRMVGGFIPVTEGRI 60
           MS + L ++ K+Y A+  VD +SL + +GELV LLGPSGCGKTTTLRM+ GFI ++ G I
Sbjct: 1   MSKLELNNVRKQYGALAVVDDLSLQLRKGELVTLLGPSGCGKTTTLRMIAGFIELSGGSI 60

Query: 61  LVGGRDLTH----LPPNKRNMGFGFQNYALFPHMSVAENVAFGLEMRKLPKAEIMAKVKT 116
            V GR ++     +PP  R M   FQ+YA++P+M+VAENVAFGL +R++P  E   +V+ 
Sbjct: 61  AVDGRQISGAGRTVPPEHRGMSMIFQSYAIWPNMTVAENVAFGLNVRRVPGEESKRRVEE 120

Query: 117 ALDRVKLSHLAERLPKQLSGGQQQRVALARALVIEPDVLLLDEPLSNLDAQLRHEMKTEI 176
            LD VKL  LA+R P +LSGGQQQRVALARA+V+ P+VLLLDEPLSNLDA LR EM  EI
Sbjct: 121 MLDVVKLGALAQRYPAELSGGQQQRVALARAMVVRPEVLLLDEPLSNLDANLREEMAGEI 180

Query: 177 RTLQQQLGITTIFVTHDQDEALSVADRVVLMRAGKIEQQGSPDDLFGRPASRFAAEFMGV 236
           R L  +   TT++VTHDQ EA++++DR+ ++  GK+EQ  +P +L+ RP +RF A F+G 
Sbjct: 181 RRLHDEFNFTTVYVTHDQTEAMTISDRIAVLNLGKLEQIDTPWNLYNRPRTRFVAGFIGQ 240

Query: 237 TNLLPGELAGVGRFRLAGGEEVRVHPVG-----VGGDLSLALRPERLALDADERDHNALP 291
           TNL+ G +   G+ RL G E V   P+G        D+ +++RP+ L L         + 
Sbjct: 241 TNLVEGHVRD-GQIRLRGLEGVL--PMGGQAAAASADMRISIRPQSLFLGPQGNGALPMG 297

Query: 292 AVVDLA-TYRGLVIDYRV-ATASGLVLIARRPSPAV 325
           AV  +A TY G   DY V  TA G  L    P  +V
Sbjct: 298 AVSVVARTYLGEYWDYLVRPTAGGDELKVHAPPSSV 333