Pairwise Alignments

Query, 493 a.a., Porin B from Xanthobacter sp. DMC5

Subject, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

 Score =  133 bits (335), Expect = 1e-35
 Identities = 106/394 (26%), Positives = 172/394 (43%), Gaps = 32/394 (8%)

Query: 77  GDWGGYRPKLAEAGIKVGVNYIGELWRNTEGGLGTGTAYNGRFQFSLDADLDKLFNW-KG 135
           GDWGG R +L E G+K+  +Y GE   N  GGL     Y+   +  +  DL KL+    G
Sbjct: 34  GDWGGLRHQLEEDGVKITGDYSGETAYNAHGGLHRSARYSQNVKLGVQFDLSKLYGLDNG 93

Query: 136 ATFHASVLQIQGSGFSGQYLGNIMGVSNVDALSTTRLFELYIEQAFGDGKSSIRFGQLSA 195
                ++   +G+  S   +GN + +        TRL EL  E+       +++ G ++ 
Sbjct: 94  GKVQLTINDRRGNSASEDLVGNRLPIQENYGGLYTRLTELSYERTLFTPALNVKLGYMAM 153

Query: 196 DSEFAISDNGSL--FLNSTF-GWPALFAADLPSGGPAYPLATPGVRVKWVPNDEWTVLVG 252
            ++    D+G L  F+N+ F G P   +    SG   YP A  GVRVK+  +  W + V 
Sbjct: 154 GNDLGGLDSGILCNFMNAGFCGHPLNMSGG--SGWTNYPNAHLGVRVKYDLSPAWQLRVA 211

Query: 253 LFNGNPAPCCGDPQEENKYGLNFIVDQGVFVIGEVAYSYNKAENAAWLPGTVKVGGWYNS 312
            FN +P     +      + L      G  V  E+ Y          LPG  K+G +Y+S
Sbjct: 212 AFNVDPE---SNGNSSRAWHLGPKHTTGTVVPVELVYKLQ-----GELPGEYKLGYYYDS 263

Query: 313 NSFNSQVYDIFGVPLASPASIGLPNQIQGDYAFYAIIDQMIWRKPGTKDKGISVFGRVTA 372
           +                   IG  +++ G    Y ++DQ +W    +  + +  FG+ +A
Sbjct: 264 SDVK---------------RIGSDDEVSGRGGHYLLVDQAVWNDQASPGRSLHAFGQYSA 308

Query: 373 APSEQNQLGFYWDGGITFKGLVPGREDDAFGVAFGNARVTNAAQQADLYTALYN-GSYYP 431
           +    +    ++  G+       GR  D   + +G A V N   +  L  A +N G  +P
Sbjct: 309 SSKAASPFTKWYGAGVVLYKPFEGRPKDTVALGYGRA-VPNPRSRDVLEDAAFNAGQQFP 367

Query: 432 -IRSSETVLEVTYSAQVMPGWTIQPDFQYIWNPG 464
            I S+E ++E++Y  Q  P   ++PD QYI  PG
Sbjct: 368 DIDSAEQLIELSYGYQATPWLNLRPDVQYIIEPG 401