Pairwise Alignments

Query, 493 a.a., Porin B from Xanthobacter sp. DMC5

Subject, 499 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

 Score =  342 bits (878), Expect = 1e-98
 Identities = 183/444 (41%), Positives = 261/444 (58%), Gaps = 8/444 (1%)

Query: 58  AAPAEEEAEPSIAPQLGW-----LGDWGGYRPKLAEAGIKVGVNYIGELWRNTEGGLGTG 112
           A PA  + +  + P   W     LG +GG R +L + G+++GV  + E+  N  GG+  G
Sbjct: 56  AHPALADGDCEVTPPGFWERDTALGSFGGARTELCKKGVQLGVTSVNEMLANPYGGVSHG 115

Query: 113 TAYNGRFQFSLDADLDKLFNWKGATFHASVLQIQGSGFSGQYLGNIMGVSNVDALSTTRL 172
               GR QF LD DL+K+   KG T HA  + I G   SG+ LGN+M VSN++A+ + RL
Sbjct: 116 GKGQGRMQFDLDIDLEKMAELKGTTLHAGAMWIYGGRISGKNLGNLMPVSNIEAIPSRRL 175

Query: 173 FELYIEQAFGDGKSSIRFGQLSADSEFAISDNGSLFLNSTFGWPALFAADLPSGGPAYPL 232
           F L+ +Q   D   S+R GQL+ D EF +S   S+F+NSTFG+P   + +LPSGG A+P+
Sbjct: 176 FTLWGQQVLFDDMLSVRLGQLAVDDEFVVSKLSSVFVNSTFGFPFGISGNLPSGGAAFPM 235

Query: 233 ATPGVRVKWVPNDEWTVLVGLFNGNPAP--CCGDPQEENKYGLNFIVDQGVFVIGEVAYS 290
            TPG RVK    DE + +   F G+PA      DPQ  N  G  F   +G F I E AY+
Sbjct: 236 PTPGARVKLNLTDEVSWMTAAFAGDPAGKFDVRDPQWRNHDGTTFSFSRGTFYITEGAYA 295

Query: 291 YNKAENAAWLPGTVKVGGWYNSNSFNSQVYDIFGVPLASPASIGLPNQIQGDYAFYAIID 350
            N+ +N+  LPGT K+G WY+S  FN Q +D  G  LAS  + G+ N ++G+   Y +ID
Sbjct: 296 VNQEKNSKGLPGTYKLGAWYHSARFNDQHFDNLGQSLASGNTTGIGNPVRGNGGVYFVID 355

Query: 351 QMIWRKPGTKDKGISVFGRVTAAPSEQNQLGFYWDGGITFKGLVPGREDDAFGVAFGNAR 410
           QM+ +     ++G+ VF R   +PS++NQ+ FY DGGI++KGL  GRE+D   +  G  +
Sbjct: 356 QMLIKGQRWSEEGLGVFLRGGVSPSDRNQVPFYLDGGISYKGLFAGREEDTLALGVGYGQ 415

Query: 411 VTNAAQQADLYTALYNGS-YYPIRSSETVLEVTYSAQVMPGWTIQPDFQYIWNPGGGVLN 469
           ++ + Q  D  T   NG    P+R  ETV+EVTY AQ+ P WTIQPD QY+ +PGG + N
Sbjct: 416 LSGSLQGLDRDTRQINGQPTRPVRDYETVIEVTYQAQITPWWTIQPDVQYVIHPGGNIPN 475

Query: 470 PNDPLGISLVKNAAVFGVRTTINY 493
           P      + + +  +FG RT I +
Sbjct: 476 PGAGSQFTPIGDTFIFGARTAIKF 499