Pairwise Alignments

Query, 785 a.a., Caffeine dehydrogenase subunit alpha from Xanthobacter sp. DMC5

Subject, 1187 a.a., nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data) from Pseudomonas putida KT2440

 Score = 59.7 bits (143), Expect = 9e-13
 Identities = 129/547 (23%), Positives = 199/547 (36%), Gaps = 111/547 (20%)

Query: 10  VGARLPRKEDDRLMRGRGQFIADIRMAGMQDVAFVRSPLAHARIRAIHVPDDLKGRVFTA 69
           VG   PR +      G   ++ D+R+  M     +R P A       H   D  G    A
Sbjct: 190 VGRSAPRVDIPGKATGELTYVHDMRLPNMLHGRVIRPPYAG------HDSGDFVGNSLLA 243

Query: 70  ADLDGVKPIRAVSGLPGFKVSEQPVLATGKVRQVGELIAMCVADTRAEAEDMAARVELDL 129
            D        +++ LPG       V+A   +R    ++A        E E+ A R   +L
Sbjct: 244 VDES------SIAHLPG-------VVAVVVIRDFVGVVA--------EREEQAIRAAHEL 282

Query: 130 E--------ELPALHDMLDARKPGAALVHEHWGDNVFLESLVNINIEAAFDAPVKISRTI 181
           +        +LP L D+  A +    +        V  +  V+  I    +A  ++SR+ 
Sbjct: 283 KVSWKPFTGKLPDLSDVAQAIRDNPRVQR-----TVLDQGDVDGGIA---NASQRLSRSY 334

Query: 182 STARQCMAPIEGRGTVVHFDHRSDQLVVHTASQMPHIVRSGLSECLGLEEGQIRIISPDV 241
               Q  A I     +  F   + Q+ V + +Q PH++R+ L+  L  +E +I II  + 
Sbjct: 335 LWPYQLHASIGPSCALADFT--AGQIRVWSGTQNPHLLRADLAWLLACDEARIEIIRMEA 392

Query: 242 GGGFGYKAILLSEDVCLG--WLTRKIGRPVRWLEDRREHLTASANCREHHYEITLYAERD 299
            G +G      ++DVC     L+R + RPVR    R +             EI      D
Sbjct: 393 AGCYGRNC---ADDVCADAVLLSRAVQRPVRVQLTREQEHVWEPKGTAQLMEIDGGLNAD 449

Query: 300 GTLRGIDCEASVDSGAY---------SAYPFSACLEAAQVASILPGPYDFPAYRCRTWSV 350
           G++   D + S  S            +  P  A  E     SI   PYD+   R  T + 
Sbjct: 450 GSVAAYDFQTSYPSNGAPTLALLLTGAVEPVPALFEMGDRTSI--PPYDYEHMRV-TIND 506

Query: 351 ATNKCPILPYRGVARTGVCFALEVALDALAAELGLAPEVVRLKNLVRPEQMPFDNITNKH 410
            T        RGV+     FA E  +D LA   G+ P   RLK+L  P            
Sbjct: 507 MTPLVRASWMRGVSAMPNSFAHESYIDELAFAAGVDPVEYRLKHLSDP------------ 554

Query: 411 FDSGNYPEALRQALDAIKADAVR------TRQLAGEPDGRRI-GLGLSIYCEQAAHGTSV 463
                      +A+D +KA A R      TR +  + +G  + G G        A+   +
Sbjct: 555 -----------RAIDLVKATAERAQWQPHTRPMQTQAEGDVLRGRGF-------AYARYI 596

Query: 464 YSGWGIPMVPGHEQAGARLTPDGGLELRIG-------AHSHGQGLETTLAQVAHEILGMP 516
           +S +     PG   A A    D  ++ R G          H  G+      V H+I G  
Sbjct: 597 HSKF-----PGFGAAWAAWVADVAVDRRTGEVAVTRVVIGHDAGMMVNPEGVRHQIHGNV 651

Query: 517 VARTRLV 523
           +  T  V
Sbjct: 652 IQSTSRV 658



 Score = 55.8 bits (133), Expect = 1e-11
 Identities = 46/142 (32%), Positives = 64/142 (45%), Gaps = 10/142 (7%)

Query: 630 SYAAHAVVVAVDPDLGEVEILDYAIVEDGGTLVNPMVVDGQIIGGLAQGIGTALYEEMAF 689
           ++AA    VAVD   GEV +    I  D G +VNP  V  QI G + Q     L E+++F
Sbjct: 606 AWAAWVADVAVDRRTGEVAVTRVVIGHDAGMMVNPEGVRHQIHGNVIQSTSRVLKEQVSF 665

Query: 690 DASGQPLASTLADYLLPGAPEVPMPFIGHMETPS-PYTKFGVKGIGEGGAIAPPAAIANA 748
           +       ST+A     G P +  P +  ++    P       G GE  ++   AAIANA
Sbjct: 666 E------ESTVASKEWGGYPILTFPELPAIDVMMLPRQHEPPMGSGESASVPSAAAIANA 719

Query: 749 INDALRPLGAEMLRSPVTPRRI 770
           I DA    G      P+T  R+
Sbjct: 720 IFDA---TGIRFRELPITAERV 738



 Score = 42.4 bits (98), Expect = 2e-07
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 1/119 (0%)

Query: 470 PMVPGHEQAGARLTPDGGLELRIGAHSH-GQGLETTLAQVAHEILGMPVARTRLVHGDTA 528
           P V   E A      D G+      H   G G+ T+LAQ+  E L + + +  +V GDT 
Sbjct: 39  PTVKERELALFIAVSDDGMVYAFNGHVDLGTGIRTSLAQIVAEELDLRMDQVHMVLGDTE 98

Query: 529 MTPYSTGSWGSRVMVMAGGAVATACTELSERIRRIGAHMLQARPEDVRLEAGRVIGPSG 587
             P    +  S  + ++   +  A       + +  A  L   PE +R+E G VI  +G
Sbjct: 99  RAPNQGATIASATLQISAVPLRKAAATARRYLLQQAALRLGCPPEMLRIEDGTVIASNG 157