Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  155 bits (393), Expect = 8e-43
 Identities = 93/287 (32%), Positives = 149/287 (51%), Gaps = 3/287 (1%)

Query: 1   MDQLLQHIFNALVLGGTYALLGIGLTLIFGIMNVVNFTHGALYTFGGYAMYLAAVALGLN 60
           +D  L  + N L LG  Y L+ +GLT+IFG++N VNF HGA +  G Y  Y A    G N
Sbjct: 2   LDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTG-N 60

Query: 61  FFVALPVALVAGLVLGAIIEFTLLRPLRRSDIDTTMLVMIGAGIIMQSGTLWIFGGVAKA 120
           F++AL +A +    L   +E  L++ +        +LV +G  +I+Q  ++ I+G V K 
Sbjct: 61  FWLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKN 120

Query: 121 VPTPFPAQP-LTFGPVSLSYVNLFVLCAAVALIAITYFTINGTKLGRAMRATFQDHDTAA 179
           +  P   +  L  G     Y  LF++  A  +    +  +  T+ G  +RA  +  +T +
Sbjct: 121 IAVPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVS 180

Query: 180 LMGVNVSLIYTATFAIGSALASAAGALLGPVYVVTPQMGDLAAVKAFAIVILGGLGSISG 239
           L+G N+  +++ TFA+G  LA  AG L  P+    P +G      AF +V++GG+GS  G
Sbjct: 181 LLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGG 240

Query: 240 ATIGGFILAFAEELGAGYISSGYRDAMGFLIIIAVLLVKPTGLFARA 286
           A +GG ++   + +       G    M +  + AV+LV+P GLF RA
Sbjct: 241 ALVGGLLVGVVQSMMTSLWPQG-ASLMIYGAMAAVILVRPYGLFGRA 286