Pairwise Alignments

Query, 349 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  127 bits (319), Expect = 4e-34
 Identities = 97/327 (29%), Positives = 161/327 (49%), Gaps = 26/327 (7%)

Query: 10  LVVFALLPLGLTDPYLLNALIITGILTICAMSLNLLLGFTGQLSLGHVAFFGIGAYVSAL 69
           L V   LPL L    L   ++I     + A++ NLLLG+TG LS G   FFG GAY +AL
Sbjct: 22  LAVLIGLPLILPSATLATEILI---FAMAALACNLLLGYTGLLSFGQGIFFGAGAYCAAL 78

Query: 70  TALGFDVSLPFGLRVTHEGGSPLLGFVLAIVLTGLCGYLIGRLSFRVRGAYFVIVTISFA 129
             +   + L           + LLG   A +  G    L+G L+ R  G YFV++T++F+
Sbjct: 79  LMIHLQLGL----------FTALLG---AAIAGGFLALLVGALAIRRTGIYFVMLTLAFS 125

Query: 130 EVVRLVALNWVELTQGPLALTAIPNMVLPVPSLGDVALRSKMQNYYLVLAVGVASYLLIA 189
           ++   VA    + T G   L ++P   + +     ++L      Y  V  + +  ++   
Sbjct: 126 QMAYFVAYTLSDWTGGDNGLLSVPRPEIRLGETVLLSLADARAFYAFVAVLFLLIFIGAR 185

Query: 190 RLVASRFGRAMRGLKENESLALSLGINATRTLTVAATVSAAMAGAAGSLYA---HYIRII 246
           R++AS FG  +  ++ENE+ A ++G +      +   +S A+ G AG+LYA   H++ + 
Sbjct: 186 RVIASPFGSTLMAIRENETRASAIGYDTRHFKILVFVLSGAVTGIAGALYAMLLHFVPLS 245

Query: 247 DPDVFLFSYTVTMVIMVVSGGKGTLAGPLVGGIIFGLLPVALRPVMAPEAQWI-VYGAIL 305
           + D+ +   +  ++IM + GG G+L G L+G     LL   L  +     +W+ + G IL
Sbjct: 246 NIDLMM---SENILIMTIVGGTGSLFGSLLGAGSIVLLGDFLSDLW---PRWLMLLGVIL 299

Query: 306 IAILFLMPRGIVPALEGLGERIAARRK 332
           I ++  M  G+   L  L ER+   RK
Sbjct: 300 ILVVIFMRGGLWGGLVSLFERVRGSRK 326