Pairwise Alignments

Query, 349 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  138 bits (347), Expect = 3e-37
 Identities = 101/341 (29%), Positives = 158/341 (46%), Gaps = 52/341 (15%)

Query: 3   RFIAPLFLVVFALLPLGLTDPYLLNALIITGILTICAMSLNLLLGFTGQLSLGHVAFFGI 62
           R+I P  +V+  + P+   + YLL  +I+  I  +  + LN+++G  G L LG+VAF+ I
Sbjct: 106 RYIIPALIVIAIVFPI-FANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAI 164

Query: 63  GAYVSAL----TALGFDVSLPFGLRVTHEGGSPLLGFVLAIVLTGLCGYLIGRLSFRVRG 118
           GAY  AL      LGF   LP                 LA +   L G ++G    R+ G
Sbjct: 165 GAYGLALGYQYLGLGFWSVLP-----------------LAAIAAALAGCILGFPVLRMHG 207

Query: 119 AYFVIVTISFAEVVRLVALNWVELTQGPLALTAIPNMVLPVPSL-----------GDVAL 167
            Y  IVT+ F E++RLV  NW+  T GP  + A      P P+            G V +
Sbjct: 208 DYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPA------PSPTFFGLEFGRRAKDGGVPI 261

Query: 168 RS----------KMQNYYLVLAVGVASYLLIA-RLVASRFGRAMRGLKENESLALSLGIN 216
                       K    Y VL + V + L I  RL     GRA   L+E+E    S+G+N
Sbjct: 262 HEFFGFEYNASLKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLN 321

Query: 217 ATRTLTVAATVSAAMAGAAGSLYAHYIRIIDPDVFLFSYTVTMVIMVVSGGKGTLAGPLV 276
                  A T+ A+ AG AG  +A Y   ++P  F F  +  ++ +VV GG G+  G ++
Sbjct: 322 HVLVKLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVI 381

Query: 277 GGIIFGLLPVALRPVMAPEAQWIVYGAILIAILFLMPRGIV 317
              +  + P  LR     E + +++G +++ ++   PRG++
Sbjct: 382 AAFVLTVAPELLRSF--SEYRVLLFGVLMVLMMIWRPRGLI 420