Pairwise Alignments

Query, 274 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  208 bits (530), Expect = 8e-59
 Identities = 110/258 (42%), Positives = 163/258 (63%), Gaps = 5/258 (1%)

Query: 6   SSAILNVEHVGMKFGGLTAIADLHFDVHEGEILSLIGPNGAGKTTAFNIMTGFLKPTQGR 65
           S  IL V  + M+FGGL A+  +   V E ++++LIGPNGAGKTT FN +TGF KP+ G 
Sbjct: 2   SREILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGGT 61

Query: 66  VLFRGRDLSQTRPNEIARLGLARTFQRTSVFADDSVRDNVLIGLHRFGDDTRATALLDRL 125
           +L  G+ +     ++IAR G+ RTFQ   +F + +  +N+LI  HR  +    T     L
Sbjct: 62  ILLDGQPIQGLAGHQIARKGVVRTFQNVRLFKEMTALENLLIAQHRHLN----TNFFAGL 117

Query: 126 FPTPAARRAENAVRERAEAIIDMVGLSARAGDKAGSLSYGEQRLVGFALALAVEPKMLLL 185
           F TP+ RR+E    ERA+  ++ V L+  A   AG+L+YG+QR +  A  +  +P++++L
Sbjct: 118 FKTPSFRRSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIML 177

Query: 186 DEPVSGMNASETQGFVRLIRKVRD-EGVTILLVEHDMPMVMEVSDRIVCLNYGRLIAEGP 244
           DEP +G+N  ET+    LI  +R+   VT+LL+EHDM +VM +SD IV +N G  +A G 
Sbjct: 178 DEPAAGLNPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGT 237

Query: 245 PEAIRTDPKVIEAYLGKS 262
           PE IR +P VI+AYLG++
Sbjct: 238 PEQIRDNPDVIKAYLGEA 255