Pairwise Alignments

Query, 313 a.a., HTH-type transcriptional regulator BenM from Xanthobacter sp. DMC5

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  161 bits (408), Expect = 2e-44
 Identities = 105/276 (38%), Positives = 149/276 (53%), Gaps = 3/276 (1%)

Query: 1   MDLRQLRYFVGVARERNFTRAAQQLNIAQPPLSRQIQALEDELGVALLIRNSRPVRLTEA 60
           M+LR LRYF+ VA E +F RAAQQL I+QPPLS+QIQALE ELG  L  R +R V L+EA
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60

Query: 61  GRLFYEQALQVLGRVDQMRAATRRVGLNQNSVLSIGFVASTLY-GGLPSLVRKLRHRAPD 119
           GRLF E+A QVL +V++     RR  L +   + IGF +S  +   +P  +   R R P 
Sbjct: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPA 120

Query: 120 IEIQVLEMMSIQQIPALKEGRIDIGFGRLHHSDSGVVEIVLREERLTVAIPRDTPLAQDS 179
           + + + EM S      + +  I++G  R      G+V   L  E L   I    PLA+ +
Sbjct: 121 VHLNLKEMSSRDVAEGVFDESIEVGLMRPMPLPEGLVATELFREPLVAVINASHPLAEGT 180

Query: 180 AP-LPIGALTGQKLIVYPKEPRPGYADQVLNLLHGHDVRPAEVHEVREIQTALGLVAAET 238
              + + AL  +  + +P+    G   Q+L+L       P    E  E  T +GLV+A  
Sbjct: 181 EQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAGL 240

Query: 239 GLCVIPSSARQMRSD-VHYRLLEGERATSPVILYHR 273
           G+ V+P+S ++MR + V YR L  E A + V L  R
Sbjct: 241 GVSVLPASFQRMRIEGVVYRTLLDEEAMTAVWLVQR 276